PlantSME Plant secondary metabolism enzyme database

Polytrichastrum alpinum (polytrichastrum_alpinum)

Imported from atlas release summary for Polytrichastrum alpinum.

607
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 164 11 POD (61) View species results
Terpenoid pathway 137 17 BAHD (50) View species results
Alkaloid pathway 115 16 NMT (17) View species results
Rosmarinic acid pathway 83 7 C4H (37) View species results
Flavonoid pathway 78 7 UFGT (24) View species results
Steroid pathway 30 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 735 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 103 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Palpscaffold_70186510 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70213940 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_70217190 Alkaloid CODM/T6ODM medium borderline
Palpscaffold_40099760 Alkaloid COR low borderline
Palpscaffold_50105860 Alkaloid COR medium pass
Palpscaffold_50108000 Alkaloid COR medium pass
Palpscaffold_50119840 Alkaloid COR medium pass
Palpscaffold_50139720 Alkaloid COR medium pass
Palpscaffold_60159740 Alkaloid COR medium pass
Palpscaffold_20031410 Alkaloid CYP719 medium borderline
Palpscaffold_20045130 Alkaloid CYP719 medium borderline
Palpscaffold_70192130 Alkaloid CYP719 medium borderline
Palpscaffold_40080420 Alkaloid CYP80B1 medium borderline
Palpscaffold_70202870 Alkaloid CYP80B1 medium borderline
Palpscaffold_10021010 Alkaloid G8O/G8H medium borderline
Palpscaffold_20034920 Alkaloid G8O/G8H medium borderline
Palpscaffold_20035800 Alkaloid G8O/G8H medium borderline
Palpscaffold_20036380 Alkaloid G8O/G8H medium borderline
Palpscaffold_20044960 Alkaloid G8O/G8H medium pass
Palpscaffold_20044970 Alkaloid G8O/G8H medium borderline
Palpscaffold_20045020 Alkaloid G8O/G8H medium borderline
Palpscaffold_30061940 Alkaloid G8O/G8H medium borderline
Palpscaffold_30062100 Alkaloid G8O/G8H medium borderline
Palpscaffold_30066890 Alkaloid G8O/G8H medium borderline
Palpscaffold_40096220 Alkaloid G8O/G8H medium borderline
Palpscaffold_40096230 Alkaloid G8O/G8H medium borderline
Palpscaffold_40101360 Alkaloid G8O/G8H medium borderline
Palpscaffold_50106570 Alkaloid G8O/G8H medium borderline
Palpscaffold_50124200 Alkaloid G8O/G8H medium borderline
Palpscaffold_50125290 Alkaloid G8O/G8H medium borderline
Palpscaffold_50129760 Alkaloid G8O/G8H medium borderline
Palpscaffold_50130140 Alkaloid G8O/G8H medium borderline
Palpscaffold_60158270 Alkaloid G8O/G8H low borderline
Palpscaffold_60167980 Alkaloid G8O/G8H low borderline
Palpscaffold_60173130 Alkaloid G8O/G8H low borderline
Palpscaffold_70187100 Alkaloid G8O/G8H medium borderline
Palpscaffold_20046640 Alkaloid GES low borderline
Palpscaffold_30076770 Alkaloid GES low borderline
Palpscaffold_50126020 Alkaloid GES low borderline
Palpscaffold_60164920 Alkaloid GES low borderline
Palpscaffold_10001910 Alkaloid GS medium pass
Palpscaffold_10008730 Alkaloid GS low borderline
Palpscaffold_10010960 Alkaloid GS low borderline
Palpscaffold_10011230 Alkaloid GS low borderline
Palpscaffold_30055620 Alkaloid GS low borderline
Palpscaffold_30055840 Alkaloid GS low borderline
Palpscaffold_30059940 Alkaloid GS low borderline
Palpscaffold_30063110 Alkaloid GS low borderline
Palpscaffold_30064180 Alkaloid GS low borderline
Palpscaffold_30074340 Alkaloid GS low borderline