PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pspiscaffold_50113810 Alkaloid 16OMT medium borderline
Pspiscaffold_60127100 Alkaloid 16OMT medium borderline
Pspiscaffold_70163340 Alkaloid 16OMT medium borderline
Pspiscaffold_70179280 Alkaloid 16OMT medium borderline
Pspiscaffold_70179420 Alkaloid 16OMT medium borderline
Pspiscaffold_90259290 Alkaloid 16OMT medium borderline
Pspiscaffold_90270850 Alkaloid 6OMT_4OMT_SOMT low borderline
Pspiscaffold_10001780 Alkaloid 7DLGT low borderline
Pspiscaffold_20041960 Alkaloid 7DLGT medium pass
Pspiscaffold_20046080 Alkaloid 7DLGT low borderline
Pspiscaffold_30066980 Alkaloid 7DLGT low borderline
Pspiscaffold_40081390 Alkaloid 7DLGT medium pass
Pspiscaffold_40081400 Alkaloid 7DLGT medium pass
Pspiscaffold_40081420 Alkaloid 7DLGT medium pass
Pspiscaffold_40081440 Alkaloid 7DLGT high pass
Pspiscaffold_40081480 Alkaloid 7DLGT medium pass
Pspiscaffold_40086160 Alkaloid 7DLGT low borderline
Pspiscaffold_50106910 Alkaloid 7DLGT low borderline
Pspiscaffold_50106970 Alkaloid 7DLGT low borderline
Pspiscaffold_60131300 Alkaloid 7DLGT low borderline
Pspiscaffold_60134170 Alkaloid 7DLGT low borderline
Pspiscaffold_60134890 Alkaloid 7DLGT low borderline
Pspiscaffold_60138060 Alkaloid 7DLGT low borderline
Pspiscaffold_60142280 Alkaloid 7DLGT medium pass
Pspiscaffold_70162090 Alkaloid 7DLGT low borderline
Pspiscaffold_70186880 Alkaloid 7DLGT medium pass
Pspiscaffold_70200680 Alkaloid 7DLGT medium pass
Pspiscaffold_70200700 Alkaloid 7DLGT low borderline
Pspiscaffold_70200720 Alkaloid 7DLGT low borderline
Pspiscaffold_70200730 Alkaloid 7DLGT medium pass
Pspiscaffold_70201170 Alkaloid 7DLGT medium pass
Pspiscaffold_80212790 Alkaloid 7DLGT medium pass
Pspiscaffold_80223250 Alkaloid 7DLGT low borderline
Pspiscaffold_90261740 Alkaloid 7DLGT low borderline
Pspiscaffold_90281690 Alkaloid 7DLGT low borderline
Pspiscaffold_90282050 Alkaloid 7DLGT medium pass
Pspiscaffold_10001770 Alkaloid 7DLH medium borderline
Pspiscaffold_10009390 Alkaloid 7DLH medium borderline
Pspiscaffold_40087130 Alkaloid 7DLH medium borderline
Pspiscaffold_50110520 Alkaloid 7DLH medium borderline
Pspiscaffold_50114310 Alkaloid 7DLH medium borderline
Pspiscaffold_50114530 Alkaloid 7DLH medium borderline
Pspiscaffold_90270040 Alkaloid 7DLH medium borderline
Pspiscaffold_90270070 Alkaloid 7DLH medium borderline
Pspiscaffold_90271920 Alkaloid 7DLH medium borderline
Pspiscaffold_90271940 Alkaloid 7DLH medium borderline
Pspiscaffold_90298620 Alkaloid 7DLH medium borderline
Pspiscaffold_10008670 Alkaloid 8HGO medium borderline
Pspiscaffold_10019950 Alkaloid 8HGO medium borderline
Pspiscaffold_30060240 Alkaloid 8HGO medium borderline