PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pspiscaffold_10000760 Flavonoid F3H low borderline
Pspiscaffold_10000770 Flavonoid F3H medium borderline
Pspiscaffold_20037590 Flavonoid F3H low borderline
Pspiscaffold_20037600 Flavonoid F3H medium borderline
Pspiscaffold_20041500 Flavonoid F3H medium borderline
Pspiscaffold_20044020 Flavonoid F3H medium borderline
Pspiscaffold_20052740 Flavonoid F3H medium borderline
Pspiscaffold_20053050 Flavonoid F3H medium borderline
Pspiscaffold_30062170 Flavonoid F3H medium pass
Pspiscaffold_30065050 Flavonoid F3H low borderline
Pspiscaffold_40077300 Flavonoid F3H medium borderline
Pspiscaffold_40084070 Flavonoid F3H medium borderline
Pspiscaffold_40087490 Flavonoid F3H medium borderline
Pspiscaffold_40088760 Flavonoid F3H medium borderline
Pspiscaffold_50090900 Flavonoid F3H medium borderline
Pspiscaffold_50097350 Flavonoid F3H medium pass
Pspiscaffold_50098770 Flavonoid F3H medium borderline
Pspiscaffold_50098780 Flavonoid F3H medium pass
Pspiscaffold_60121340 Flavonoid F3H medium borderline
Pspiscaffold_60121440 Flavonoid F3H medium borderline
Pspiscaffold_60124020 Flavonoid F3H low borderline
Pspiscaffold_60132250 Flavonoid F3H low borderline
Pspiscaffold_60137870 Flavonoid F3H medium borderline
Pspiscaffold_60139250 Flavonoid F3H low borderline
Pspiscaffold_70168520 Flavonoid F3H medium borderline
Pspiscaffold_70170300 Flavonoid F3H low borderline
Pspiscaffold_70193700 Flavonoid F3H medium borderline
Pspiscaffold_70201980 Flavonoid F3H medium borderline
Pspiscaffold_70202630 Flavonoid F3H medium borderline
Pspiscaffold_70202650 Flavonoid F3H low borderline
Pspiscaffold_80209250 Flavonoid F3H medium borderline
Pspiscaffold_80210990 Flavonoid F3H medium borderline
Pspiscaffold_80225460 Flavonoid F3H medium borderline
Pspiscaffold_80235180 Flavonoid F3H medium pass
Pspiscaffold_80247370 Flavonoid F3H medium borderline
Pspiscaffold_80249830 Flavonoid F3H low borderline
Pspiscaffold_80249850 Flavonoid F3H medium borderline
Pspiscaffold_80251730 Flavonoid F3H medium pass
Pspiscaffold_80254670 Flavonoid F3H medium borderline
Pspiscaffold_90258450 Flavonoid F3H low borderline
Pspiscaffold_90266470 Flavonoid F3H medium borderline
Pspiscaffold_90266480 Flavonoid F3H medium borderline
Pspiscaffold_90267560 Flavonoid F3H medium borderline
Pspiscaffold_90281320 Flavonoid F3H medium borderline