PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Pspiscaffold_10001960 Alkaloid T3O medium borderline
Pspiscaffold_10003010 Alkaloid T3O medium borderline
Pspiscaffold_10009310 Alkaloid T3O medium pass
Pspiscaffold_10012130 Alkaloid T3O medium pass
Pspiscaffold_10019960 Alkaloid T3O medium pass
Pspiscaffold_20054080 Alkaloid T3O medium borderline
Pspiscaffold_40075780 Alkaloid T3O medium borderline
Pspiscaffold_40080130 Alkaloid T3O medium pass
Pspiscaffold_40082420 Alkaloid T3O medium borderline
Pspiscaffold_50110350 Alkaloid T3O medium pass
Pspiscaffold_60123160 Alkaloid T3O low borderline
Pspiscaffold_60144530 Alkaloid T3O medium borderline
Pspiscaffold_70151790 Alkaloid T3O medium borderline
Pspiscaffold_70154680 Alkaloid T3O medium pass
Pspiscaffold_70163720 Alkaloid T3O medium pass
Pspiscaffold_70167630 Alkaloid T3O medium borderline
Pspiscaffold_70175940 Alkaloid T3O medium pass
Pspiscaffold_70178160 Alkaloid T3O medium borderline
Pspiscaffold_70180100 Alkaloid T3O medium pass
Pspiscaffold_70182500 Alkaloid T3O medium borderline
Pspiscaffold_70192320 Alkaloid T3O medium pass
Pspiscaffold_80208940 Alkaloid T3O low borderline
Pspiscaffold_80235000 Alkaloid T3O medium borderline
Pspiscaffold_80248580 Alkaloid T3O low borderline
Pspiscaffold_80254310 Alkaloid T3O medium borderline
Pspiscaffold_90263030 Alkaloid T3O medium borderline
Pspiscaffold_90263330 Alkaloid T3O medium borderline
Pspiscaffold_90263340 Alkaloid T3O medium borderline
Pspiscaffold_90269040 Alkaloid T3O medium borderline
Pspiscaffold_90270470 Alkaloid T3O medium borderline
Pspiscaffold_90279510 Alkaloid T3O medium pass
Pspiscaffold_90285620 Alkaloid T3O low borderline
Pspiscaffold_90285630 Alkaloid T3O low borderline
Pspiscaffold_90292620 Alkaloid T3O medium pass
Pspiscaffold_90292690 Alkaloid T3O medium pass
Pspiscaffold_90294500 Alkaloid T3O medium borderline
Pspiscaffold_90295460 Alkaloid T3O medium borderline
Pspiscaffold_90295480 Alkaloid T3O medium borderline
Pspiscaffold_90295510 Alkaloid T3O medium borderline