PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Pspiscaffold_10002640 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_10009310 Steroid DWF4/CYP90B1 medium borderline
Pspiscaffold_10012130 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_10019960 Steroid DWF4/CYP90B1 medium borderline
Pspiscaffold_20045010 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_20045030 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_50114310 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_60144530 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_60146610 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_60146720 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_70163720 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_70167630 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_70176870 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_70178240 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_70182500 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80208940 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80216150 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80217420 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80228020 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80231580 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80231810 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80231840 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80237500 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80244980 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_80248580 Steroid DWF4/CYP90B1 medium borderline
Pspiscaffold_80254310 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90261720 Steroid DWF4/CYP90B1 medium borderline
Pspiscaffold_90263030 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90269030 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90269040 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90269050 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90270470 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90271940 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90292620 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90292690 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90293630 Steroid DWF4/CYP90B1 low borderline
Pspiscaffold_90298620 Steroid DWF4/CYP90B1 low borderline