PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Pspiscaffold_100025620 Alkaloid GS medium pass
Pspiscaffold_10005470 Alkaloid GS medium pass
Pspiscaffold_10005480 Alkaloid GS medium pass
Pspiscaffold_10012480 Alkaloid GS medium pass
Pspiscaffold_10019980 Alkaloid GS low borderline
Pspiscaffold_20049720 Alkaloid GS low borderline
Pspiscaffold_30056030 Alkaloid GS low borderline
Pspiscaffold_30073210 Alkaloid GS low borderline
Pspiscaffold_40077540 Alkaloid GS low borderline
Pspiscaffold_40085780 Alkaloid GS low borderline
Pspiscaffold_40085910 Alkaloid GS low borderline
Pspiscaffold_50090920 Alkaloid GS low borderline
Pspiscaffold_50091580 Alkaloid GS low borderline
Pspiscaffold_50097510 Alkaloid GS low borderline
Pspiscaffold_50104850 Alkaloid GS medium pass
Pspiscaffold_50110710 Alkaloid GS low borderline
Pspiscaffold_60121980 Alkaloid GS medium pass
Pspiscaffold_60123200 Alkaloid GS low borderline
Pspiscaffold_60127570 Alkaloid GS high pass
Pspiscaffold_60136840 Alkaloid GS high pass
Pspiscaffold_60136880 Alkaloid GS high pass
Pspiscaffold_60137920 Alkaloid GS high pass
Pspiscaffold_60137960 Alkaloid GS medium pass
Pspiscaffold_60142670 Alkaloid GS low borderline
Pspiscaffold_60143360 Alkaloid GS low borderline
Pspiscaffold_70163400 Alkaloid GS low borderline
Pspiscaffold_70170790 Alkaloid GS high pass
Pspiscaffold_70184650 Alkaloid GS low borderline
Pspiscaffold_80210080 Alkaloid GS medium pass
Pspiscaffold_80210100 Alkaloid GS low borderline
Pspiscaffold_80225980 Alkaloid GS low borderline
Pspiscaffold_80228970 Alkaloid GS low borderline
Pspiscaffold_80229990 Alkaloid GS low borderline
Pspiscaffold_80248420 Alkaloid GS low borderline
Pspiscaffold_80254000 Alkaloid GS low borderline
Pspiscaffold_90272580 Alkaloid GS low borderline
Pspiscaffold_90290960 Alkaloid GS low borderline