PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_10005380 Rosmarinic Acid 4CL medium pass
Pspiscaffold_20048240 Rosmarinic Acid 4CL low borderline
Pspiscaffold_40088030 Rosmarinic Acid 4CL low borderline
Pspiscaffold_410089500 Rosmarinic Acid 4CL medium pass
Pspiscaffold_50103370 Rosmarinic Acid 4CL low borderline
Pspiscaffold_50116290 Rosmarinic Acid 4CL medium pass
Pspiscaffold_60127770 Rosmarinic Acid 4CL low borderline
Pspiscaffold_60136800 Rosmarinic Acid 4CL medium pass
Pspiscaffold_60145630 Rosmarinic Acid 4CL low borderline
Pspiscaffold_70168500 Rosmarinic Acid 4CL medium pass
Pspiscaffold_70180040 Rosmarinic Acid 4CL low borderline
Pspiscaffold_70181000 Rosmarinic Acid 4CL medium pass
Pspiscaffold_70188990 Rosmarinic Acid 4CL low borderline
Pspiscaffold_80223170 Rosmarinic Acid 4CL low borderline
Pspiscaffold_80232480 Rosmarinic Acid 4CL low borderline
Pspiscaffold_80234880 Rosmarinic Acid 4CL medium pass
Pspiscaffold_80236630 Rosmarinic Acid 4CL medium pass
Pspiscaffold_80236680 Rosmarinic Acid 4CL medium pass
Pspiscaffold_80239930 Rosmarinic Acid 4CL low borderline
Pspiscaffold_80249910 Rosmarinic Acid 4CL medium pass
Pspiscaffold_80253240 Rosmarinic Acid 4CL medium pass
Pspiscaffold_90259980 Rosmarinic Acid 4CL low borderline
Pspiscaffold_90261590 Rosmarinic Acid 4CL low borderline
Pspiscaffold_90277180 Rosmarinic Acid 4CL low borderline
Pspiscaffold_90293720 Rosmarinic Acid 4CL medium pass
Pspiscaffold_90294530 Rosmarinic Acid 4CL medium pass
Pspiscaffold_90298600 Rosmarinic Acid 4CL medium pass
Pspiscaffold_10001770 Rosmarinic Acid C4H low borderline
Pspiscaffold_10001960 Rosmarinic Acid C4H low borderline
Pspiscaffold_10002640 Rosmarinic Acid C4H low borderline
Pspiscaffold_10003010 Rosmarinic Acid C4H medium pass
Pspiscaffold_10008660 Rosmarinic Acid C4H medium pass
Pspiscaffold_10009310 Rosmarinic Acid C4H low borderline
Pspiscaffold_10009390 Rosmarinic Acid C4H low borderline
Pspiscaffold_10011180 Rosmarinic Acid C4H low borderline
Pspiscaffold_10012130 Rosmarinic Acid C4H low borderline
Pspiscaffold_10019960 Rosmarinic Acid C4H low borderline
Pspiscaffold_20039580 Rosmarinic Acid C4H low borderline
Pspiscaffold_20044820 Rosmarinic Acid C4H low borderline
Pspiscaffold_20045010 Rosmarinic Acid C4H low borderline
Pspiscaffold_20045030 Rosmarinic Acid C4H low borderline
Pspiscaffold_20049830 Rosmarinic Acid C4H low borderline
Pspiscaffold_20051250 Rosmarinic Acid C4H low borderline
Pspiscaffold_20054080 Rosmarinic Acid C4H low borderline
Pspiscaffold_270055810 Rosmarinic Acid C4H low borderline
Pspiscaffold_30061510 Rosmarinic Acid C4H medium pass
Pspiscaffold_30063320 Rosmarinic Acid C4H medium pass
Pspiscaffold_30070910 Rosmarinic Acid C4H low borderline
Pspiscaffold_40074530 Rosmarinic Acid C4H low borderline
Pspiscaffold_40075780 Rosmarinic Acid C4H medium pass