Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 23.12% Alkaloid pathway 21.93% Terpenoid pathway 19.82% Flavonoid pathway 18.63% Rosmarinic acid pathway 10.83% Steroid pathway 5.68%

Family Distribution

757 Candidate Genes

C4H 6.84% BAHD 5.46% C3'H/CYP98A 5.3% POD 4.97% 4CL 4.47% PAL 4.3% CYP76 3.81% PYKS 3.7%

Other Families 61.15%

More Families (97)

NMT 64 3.53% CHS 64 3.53% IFS 49 2.7% F3H 44 2.43% BR6OX2/CYP85A2 41 2.26% STR 40 2.21% T3O 39 2.15% F3'H/CYP75B 39 2.15% GS 37 2.04% IFR 37 2.04% DWF4/CYP90B1 37 2.04% UFGT 30 1.66% UGT 30 1.66% 7DLGT 29 1.6% CODM/T6ODM 28 1.55% CAD 23 1.27% IO 22 1.21% T16H 21 1.16% SMT1/SMT2/SMT3 21 1.16% CYP71 18 0.99% H6H 17 0.94% CAS 17 0.94% LAC 15 0.83% COMT 14 0.77% SLS 13 0.72% NCS 13 0.72% RAS 13 0.72% HCT 12 0.66% 7DLH 11 0.61% SGD 10 0.55% PMT 10 0.55% F3'5'H/CYP75A 10 0.55% TRI/TRII 9 0.5% CSE 9 0.5% CNMT 8 0.44% 8HGO 8 0.44% COR 8 0.44% CPD/CYP90A1 8 0.44% SQS/FDFT1 8 0.44% CYP90D1 8 0.44% CCR 7 0.39% BR6OX1/CYP85A1 7 0.39% G8O/G8H 6 0.33% 16OMT 6 0.33% FNS 6 0.33% HDS/IspG 6 0.33% BBE 5 0.28% ANR 5 0.28% TAT 5 0.28% CPR 5 0.28% DWF5 5 0.28% DWF1 5 0.28% GGPPS 5 0.28% AACT 5 0.28% TDC 4 0.22% MPO 4 0.22% LAMT 4 0.22% GES 4 0.22% CHI 4 0.22% F5H/CYP84A 4 0.22% MVK 4 0.22% TPS 4 0.22% TYDC_DDC 3 0.17% ISY 3 0.17% DFR 3 0.17% SQE 3 0.17% DET2 3 0.17% ROT3/CYP90C1 3 0.17% SMO1/SMO2 3 0.17% HYD1 3 0.17% ADC 2 0.11% CYP719 2 0.11% FLS 2 0.11% ANS/LDOX 2 0.11% CCoAOMT 2 0.11% CYP51G1 2 0.11% FPPS 2 0.11% HMGS 2 0.11% HDR/IspH 2 0.11% MVD 2 0.11% DXR 2 0.11% MCT/IspD 2 0.11% DXS 2 0.11% XMT_MXMT_DXMT 1 0.06% CYP80F1 1 0.06% CYP80B1 1 0.06% 6OMT_4OMT_SOMT 1 0.06% ODC 1 0.06% HPPR 1 0.06% CPI1 1 0.06% FK 1 0.06% DWF7 1 0.06% IDI 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06% PMK 1 0.06% HMGR 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	175	10	POD (83)	View species results
Alkaloid pathway	166	16	PYKS (51)	View species results
Terpenoid pathway	150	19	BAHD (65)	View species results
Flavonoid pathway	141	9	CHS (61)	View species results
Rosmarinic acid pathway	82	7	C4H (31)	View species results
Steroid pathway	43	12	CAS (14)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	631	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	124	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAD

Gene	Pathway	Family	Confidence	Status	Best Target
Pspiscaffold_10005470	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
Pspiscaffold_10005480	Phenylpropanoid	CAD	medium	pass	CAD__00013__sp_Q0JA75_CADH7_ORYSJ
Pspiscaffold_20049070	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pspiscaffold_30056030	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pspiscaffold_30060240	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pspiscaffold_30073210	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pspiscaffold_50097510	Phenylpropanoid	CAD	low	borderline	CAD__00007__sp_O24562_CADH_MAIZE
Pspiscaffold_60119730	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pspiscaffold_60121800	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pspiscaffold_60127570	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
Pspiscaffold_60136840	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pspiscaffold_60136880	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pspiscaffold_60137920	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
Pspiscaffold_60137960	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pspiscaffold_60143360	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pspiscaffold_70170790	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pspiscaffold_70184650	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pspiscaffold_80241730	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pspiscaffold_80248420	Phenylpropanoid	CAD	low	borderline	CAD__00008__sp_O49482_CADH5_ARATH
Pspiscaffold_90259390	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pspiscaffold_90259400	Phenylpropanoid	CAD	medium	pass	CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pspiscaffold_90272580	Phenylpropanoid	CAD	low	borderline	CAD__00007__sp_O24562_CADH_MAIZE
Pspiscaffold_90290960	Phenylpropanoid	CAD	low	borderline	CAD__00014__sp_Q2KNL5_CADH1_OCIBA