PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bith10011600 Alkaloid 16OMT medium borderline
Bith1490040440 Alkaloid 16OMT medium borderline
Bith1660058860 Alkaloid 16OMT medium borderline
Bith1970093650 Alkaloid 16OMT medium borderline
Bith1970093680 Alkaloid 16OMT medium borderline
Bith1970093690 Alkaloid 16OMT medium borderline
Bith1970093720 Alkaloid 16OMT medium borderline
Bith990265800 Alkaloid 16OMT medium borderline
Bith130025540 Alkaloid 6OMT_4OMT_SOMT medium borderline
Bith10007330 Alkaloid 7DLGT medium pass
Bith10011550 Alkaloid 7DLGT low borderline
Bith10012120 Alkaloid 7DLGT low borderline
Bith1070019060 Alkaloid 7DLGT low borderline
Bith1312880032210 Alkaloid 7DLGT low borderline
Bith1312890032220 Alkaloid 7DLGT low borderline
Bith1690066800 Alkaloid 7DLGT low borderline
Bith1690066810 Alkaloid 7DLGT low borderline
Bith1770076100 Alkaloid 7DLGT medium pass
Bith1790079240 Alkaloid 7DLGT medium pass
Bith1820082930 Alkaloid 7DLGT low borderline
Bith1840083910 Alkaloid 7DLGT low borderline
Bith1880087620 Alkaloid 7DLGT low borderline
Bith1970097850 Alkaloid 7DLGT medium pass
Bith2190109250 Alkaloid 7DLGT low borderline
Bith2230110760 Alkaloid 7DLGT high pass
Bith2290123050 Alkaloid 7DLGT low borderline
Bith2310123610 Alkaloid 7DLGT low borderline
Bith2310123630 Alkaloid 7DLGT low borderline
Bith2410132160 Alkaloid 7DLGT medium pass
Bith2410132170 Alkaloid 7DLGT medium pass
Bith2410132180 Alkaloid 7DLGT high pass
Bith2680160760 Alkaloid 7DLGT low borderline
Bith320173250 Alkaloid 7DLGT low borderline
Bith320173270 Alkaloid 7DLGT low borderline
Bith340185520 Alkaloid 7DLGT medium pass
Bith390191310 Alkaloid 7DLGT low borderline
Bith60208810 Alkaloid 7DLGT high pass
Bith60208850 Alkaloid 7DLGT medium pass
Bith60208870 Alkaloid 7DLGT low borderline
Bith610213640 Alkaloid 7DLGT low borderline
Bith720234630 Alkaloid 7DLGT medium pass
Bith880248780 Alkaloid 7DLGT low borderline
Bith1480038850 Alkaloid 7DLH medium borderline
Bith1530048500 Alkaloid 7DLH medium borderline
Bith2250120920 Alkaloid 7DLH medium borderline
Bith2560144070 Alkaloid 7DLH medium borderline
Bith2560144080 Alkaloid 7DLH medium borderline
Bith2560144110 Alkaloid 7DLH medium borderline
Bith2560144120 Alkaloid 7DLH medium borderline
Bith2560144610 Alkaloid 7DLH medium borderline