PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Bith100014580 Flavonoid PAL low borderline PAL__00003__sp_P45724_PAL2_ARATH
Bith1760072010 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Bith2910168600 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith320176850 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith3470187990 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith50197570 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith580203710 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith580203730 Flavonoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith921610259150 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith990264920 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bith100014580 Phenylpropanoid PAL low borderline PAL__00003__sp_P45724_PAL2_ARATH
Bith1760072010 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Bith2910168600 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith320176850 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith3470187990 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith50197570 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith580203710 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith580203730 Phenylpropanoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith921610259150 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith990264920 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bith100014580 Rosmarinic Acid PAL low borderline PAL__00003__sp_P45724_PAL2_ARATH
Bith1760072010 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Bith2910168600 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith320176850 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith3470187990 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith50197570 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith580203710 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith580203730 Rosmarinic Acid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith921610259150 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bith990264920 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR