PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bith3310181920 Alkaloid 7DLH medium borderline
Bith3310182400 Alkaloid 7DLH medium borderline
Bith710230950 Alkaloid 7DLH medium borderline
Bith90250200 Alkaloid 7DLH medium borderline
Bith10004210 Alkaloid 8HGO low borderline
Bith1480034640 Alkaloid 8HGO medium borderline
Bith1660059100 Alkaloid 8HGO medium borderline
Bith20101880 Alkaloid 8HGO medium borderline
Bith320173730 Alkaloid 8HGO medium borderline
Bith3220178270 Alkaloid 8HGO low borderline
Bith700229240 Alkaloid 8HGO medium borderline
Bith923780260220 Alkaloid 8HGO low borderline
Bith990266560 Alkaloid 8HGO medium borderline
Bith130026000 Alkaloid ADC medium pass
Bith720235150 Alkaloid ADC medium pass
Bith10005480 Alkaloid BBE low borderline
Bith1510044310 Alkaloid BBE low borderline
Bith2340123720 Alkaloid BBE low borderline
Bith2470134380 Alkaloid BBE low borderline
Bith920070258460 Alkaloid BBE low borderline
Bith1070019580 Alkaloid CNMT low borderline
Bith1660062050 Alkaloid CNMT low borderline
Bith1690067800 Alkaloid CNMT low borderline
Bith1790078370 Alkaloid CNMT low borderline
Bith20101720 Alkaloid CNMT low borderline
Bith2620152090 Alkaloid CNMT low borderline
Bith3310180440 Alkaloid CNMT low borderline
Bith610213520 Alkaloid CNMT low borderline
Bith870247440 Alkaloid CNMT medium borderline
Bith921530259070 Alkaloid CNMT low borderline
Bith130027260 Alkaloid CODM/T6ODM medium borderline
Bith1480040000 Alkaloid CODM/T6ODM medium borderline
Bith1510043510 Alkaloid CODM/T6ODM medium borderline
Bith1510045200 Alkaloid CODM/T6ODM medium borderline
Bith1690068180 Alkaloid CODM/T6ODM medium borderline
Bith1690068930 Alkaloid CODM/T6ODM medium borderline
Bith1700070080 Alkaloid CODM/T6ODM medium borderline
Bith1700070660 Alkaloid CODM/T6ODM medium borderline
Bith2180106630 Alkaloid CODM/T6ODM medium borderline
Bith2190108270 Alkaloid CODM/T6ODM medium borderline
Bith2190108360 Alkaloid CODM/T6ODM medium borderline
Bith2240118760 Alkaloid CODM/T6ODM medium borderline
Bith2590148350 Alkaloid CODM/T6ODM medium borderline
Bith2680157360 Alkaloid CODM/T6ODM medium borderline
Bith300172140 Alkaloid CODM/T6ODM low borderline
Bith3320184240 Alkaloid CODM/T6ODM medium borderline
Bith3470187660 Alkaloid CODM/T6ODM medium borderline
Bith460195900 Alkaloid CODM/T6ODM medium borderline
Bith60208400 Alkaloid CODM/T6ODM medium borderline
Bith610214430 Alkaloid CODM/T6ODM medium borderline