PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bith70224010 Alkaloid CODM/T6ODM medium borderline
Bith70225600 Alkaloid CODM/T6ODM medium borderline
Bith720237050 Alkaloid CODM/T6ODM medium borderline
Bith790243330 Alkaloid CODM/T6ODM medium borderline
Bith130026950 Alkaloid COR medium pass
Bith1680063160 Alkaloid COR medium pass
Bith2230112620 Alkaloid COR medium pass
Bith2390129150 Alkaloid COR medium pass
Bith2560142000 Alkaloid COR medium pass
Bith2680158070 Alkaloid COR medium pass
Bith320174600 Alkaloid COR medium pass
Bith720235290 Alkaloid COR medium pass
Bith2360126300 Alkaloid CYP719 medium borderline
Bith925520261280 Alkaloid CYP719 medium borderline
Bith10006450 Alkaloid CYP80B1 low borderline
Bith1970090920 Alkaloid CYP80B1 medium borderline
Bith2150103380 Alkaloid CYP80B1 low borderline
Bith2230110540 Alkaloid CYP80B1 medium borderline
Bith2230110580 Alkaloid CYP80B1 medium borderline
Bith260149280 Alkaloid CYP80B1 medium borderline
Bith260149350 Alkaloid CYP80B1 medium pass
Bith2620152660 Alkaloid CYP80B1 medium borderline
Bith420194370 Alkaloid CYP80B1 medium borderline
Bith600210440 Alkaloid CYP80B1 medium borderline
Bith1670062330 Alkaloid CYP80F1 medium borderline
Bith2410132800 Alkaloid CYP80F1 low borderline
Bith100014840 Alkaloid G8O/G8H medium borderline
Bith120021720 Alkaloid G8O/G8H medium borderline
Bith1480038840 Alkaloid G8O/G8H medium borderline
Bith1660059080 Alkaloid G8O/G8H medium borderline
Bith1970091100 Alkaloid G8O/G8H medium borderline
Bith1970098480 Alkaloid G8O/G8H medium borderline
Bith2400130850 Alkaloid G8O/G8H medium borderline
Bith2470134730 Alkaloid G8O/G8H medium borderline
Bith2690161460 Alkaloid G8O/G8H medium borderline
Bith70223800 Alkaloid G8O/G8H medium pass
Bith90251210 Alkaloid G8O/G8H medium borderline
Bith1770072560 Alkaloid GES low borderline
Bith90253210 Alkaloid GES medium pass
Bith10005770 Alkaloid GS low borderline
Bith10006480 Alkaloid GS low borderline
Bith1030016590 Alkaloid GS low borderline
Bith1070020380 Alkaloid GS low borderline
Bith1140510021430 Alkaloid GS low borderline
Bith1140530021440 Alkaloid GS low borderline
Bith1510042990 Alkaloid GS low borderline
Bith1510043480 Alkaloid GS low borderline
Bith1600056390 Alkaloid GS low borderline
Bith1660060960 Alkaloid GS medium pass
Bith1660061300 Alkaloid GS medium pass