Lepidozia reptans (lepidozia_reptans)
Imported from atlas release summary for Lepidozia reptans.
633
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
633
Candidate Genes
C4H
7.01%
BAHD
6.12%
C3'H/CYP98A
5.23%
4CL
4.84%
CYP76
4.84%
POD
3.67%
IFS
3.45%
NMT
3.17%
Other Families
61.66%
More Families (94)
STR
52
2.89%
BR6OX2/CYP85A2
46
2.56%
F3H
45
2.5%
DWF4/CYP90B1
45
2.5%
UGT
43
2.39%
T3O
42
2.34%
7DLGT
42
2.34%
IFR
40
2.23%
UFGT
40
2.23%
PAL
36
2.0%
GS
33
1.84%
COMT
28
1.56%
F3'H/CYP75B
27
1.5%
H6H
24
1.34%
G8O/G8H
24
1.34%
CODM/T6ODM
24
1.34%
RAS
24
1.34%
CAD
21
1.17%
HCT
20
1.11%
TRI/TRII
19
1.06%
IO
17
0.95%
T16H
17
0.95%
CSE
16
0.89%
SMT1/SMT2/SMT3
16
0.89%
ANR
15
0.83%
F3'5'H/CYP75A
15
0.83%
SGD
14
0.78%
16OMT
13
0.72%
COR
13
0.72%
CAS
13
0.72%
PYKS
12
0.67%
TPS
12
0.67%
CNMT
11
0.61%
CCR
11
0.61%
CYP71
11
0.61%
AACT
10
0.56%
SLS
9
0.5%
LAMT
8
0.45%
NCS
8
0.45%
8HGO
7
0.39%
FNS
7
0.39%
CHS
7
0.39%
LAC
7
0.39%
HPPR
7
0.39%
SQS/FDFT1
7
0.39%
CYP80B1
6
0.33%
PMT
6
0.33%
GES
6
0.33%
DFR
6
0.33%
F5H/CYP84A
6
0.33%
CPD/CYP90A1
6
0.33%
BR6OX1/CYP85A1
6
0.33%
GGPPS
6
0.33%
CCoAOMT
5
0.28%
TAT
5
0.28%
CPR
5
0.28%
DET2
5
0.28%
ISY
4
0.22%
7DLH
4
0.22%
CYP90D1
4
0.22%
IDI
4
0.22%
ADC
3
0.17%
CYP719
3
0.17%
6OMT_4OMT_SOMT
3
0.17%
ANS/LDOX
3
0.17%
CHI
3
0.17%
CYP51G1
3
0.17%
SMO1/SMO2
3
0.17%
DXR
3
0.17%
FPPS
3
0.17%
DXS
3
0.17%
BBE
2
0.11%
XMT_MXMT_DXMT
2
0.11%
MPO
2
0.11%
FLS
2
0.11%
DWF7
2
0.11%
DWF1
2
0.11%
ROT3/CYP90C1
2
0.11%
HYD1
2
0.11%
SQE
2
0.11%
MDS/IspF
2
0.11%
MVD
2
0.11%
PMK
2
0.11%
MVK
2
0.11%
TDC
1
0.06%
FK
1
0.06%
DWF5
1
0.06%
CPI1
1
0.06%
HDS/IspG
1
0.06%
HMGS
1
0.06%
MCT/IspD
1
0.06%
HMGR
1
0.06%
CMK/IspE
1
0.06%
HDR/IspH
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 146 | 19 | BAHD (62) | View species results |
| Phenylpropanoid pathway | 145 | 11 | POD (60) | View species results |
| Alkaloid pathway | 127 | 17 | NMT (21) | View species results |
| Flavonoid pathway | 98 | 10 | UFGT (37) | View species results |
| Rosmarinic acid pathway | 79 | 7 | C4H (36) | View species results |
| Steroid pathway | 38 | 14 | CAS (10) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 662 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 154 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Lrep1100520005390 | Alkaloid | 16OMT | medium | borderline |
| Lrep1579530028910 | Alkaloid | 16OMT | medium | borderline |
| Lrep1636410048860 | Alkaloid | 16OMT | medium | borderline |
| Lrep1647970060850 | Alkaloid | 16OMT | medium | borderline |
| Lrep1657510074620 | Alkaloid | 16OMT | medium | borderline |
| Lrep1657740075510 | Alkaloid | 16OMT | medium | borderline |
| Lrep1659290077630 | Alkaloid | 16OMT | medium | borderline |
| Lrep1669810101150 | Alkaloid | 16OMT | medium | borderline |
| Lrep1670650104400 | Alkaloid | 16OMT | medium | borderline |
| Lrep1674050117550 | Alkaloid | 16OMT | medium | borderline |
| Lrep1677260139080 | Alkaloid | 16OMT | medium | borderline |
| Lrep1684120187630 | Alkaloid | 16OMT | medium | borderline |
| Lrep1684120187640 | Alkaloid | 16OMT | medium | borderline |
| Lrep1662030082050 | Alkaloid | 6OMT_4OMT_SOMT | low | borderline |
| Lrep1674780121910 | Alkaloid | 6OMT_4OMT_SOMT | medium | borderline |
| Lrep1681210176840 | Alkaloid | 6OMT_4OMT_SOMT | low | borderline |
| Lrep1372840014260 | Alkaloid | 7DLGT | low | borderline |
| Lrep1538430022180 | Alkaloid | 7DLGT | medium | pass |
| Lrep1545660024440 | Alkaloid | 7DLGT | low | borderline |
| Lrep1545660024480 | Alkaloid | 7DLGT | low | borderline |
| Lrep1550620026150 | Alkaloid | 7DLGT | medium | pass |
| Lrep1557130027980 | Alkaloid | 7DLGT | low | borderline |
| Lrep1583900030030 | Alkaloid | 7DLGT | low | borderline |
| Lrep1631170046130 | Alkaloid | 7DLGT | medium | pass |
| Lrep1639750054190 | Alkaloid | 7DLGT | low | borderline |
| Lrep1646430058350 | Alkaloid | 7DLGT | low | borderline |
| Lrep1654150070420 | Alkaloid | 7DLGT | medium | pass |
| Lrep1655070072180 | Alkaloid | 7DLGT | low | borderline |
| Lrep1655070072190 | Alkaloid | 7DLGT | low | borderline |
| Lrep1655070072200 | Alkaloid | 7DLGT | low | borderline |
| Lrep1663290083280 | Alkaloid | 7DLGT | low | borderline |
| Lrep1663290083290 | Alkaloid | 7DLGT | medium | pass |
| Lrep1663290083300 | Alkaloid | 7DLGT | medium | pass |
| Lrep1664550088520 | Alkaloid | 7DLGT | low | borderline |
| Lrep1664550088570 | Alkaloid | 7DLGT | low | borderline |
| Lrep1665650090440 | Alkaloid | 7DLGT | low | borderline |
| Lrep1666440091570 | Alkaloid | 7DLGT | medium | pass |
| Lrep1666890093760 | Alkaloid | 7DLGT | low | borderline |
| Lrep1666900093940 | Alkaloid | 7DLGT | medium | pass |
| Lrep1666900093970 | Alkaloid | 7DLGT | medium | pass |
| Lrep1669330099750 | Alkaloid | 7DLGT | low | borderline |
| Lrep1670570103710 | Alkaloid | 7DLGT | medium | pass |
| Lrep1671230106190 | Alkaloid | 7DLGT | low | borderline |
| Lrep1673680114790 | Alkaloid | 7DLGT | low | borderline |
| Lrep1675090124860 | Alkaloid | 7DLGT | low | borderline |
| Lrep1676500133390 | Alkaloid | 7DLGT | medium | pass |
| Lrep1676660135150 | Alkaloid | 7DLGT | low | borderline |
| Lrep1677270139250 | Alkaloid | 7DLGT | low | borderline |
| Lrep1677450140070 | Alkaloid | 7DLGT | medium | pass |
| Lrep1678930153090 | Alkaloid | 7DLGT | low | borderline |