Lepidozia reptans (lepidozia_reptans)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 23.06% Phenylpropanoid pathway 22.91% Alkaloid pathway 20.06% Flavonoid pathway 15.48% Rosmarinic acid pathway 12.48% Steroid pathway 6.0%

Family Distribution

633 Candidate Genes

C4H 7.01% BAHD 6.12% C3'H/CYP98A 5.23% 4CL 4.84% CYP76 4.84% POD 3.67% IFS 3.45% NMT 3.17%

Other Families 61.66%

More Families (94)

STR 52 2.89% BR6OX2/CYP85A2 46 2.56% F3H 45 2.5% DWF4/CYP90B1 45 2.5% UGT 43 2.39% T3O 42 2.34% 7DLGT 42 2.34% IFR 40 2.23% UFGT 40 2.23% PAL 36 2.0% GS 33 1.84% COMT 28 1.56% F3'H/CYP75B 27 1.5% H6H 24 1.34% G8O/G8H 24 1.34% CODM/T6ODM 24 1.34% RAS 24 1.34% CAD 21 1.17% HCT 20 1.11% TRI/TRII 19 1.06% IO 17 0.95% T16H 17 0.95% CSE 16 0.89% SMT1/SMT2/SMT3 16 0.89% ANR 15 0.83% F3'5'H/CYP75A 15 0.83% SGD 14 0.78% 16OMT 13 0.72% COR 13 0.72% CAS 13 0.72% PYKS 12 0.67% TPS 12 0.67% CNMT 11 0.61% CCR 11 0.61% CYP71 11 0.61% AACT 10 0.56% SLS 9 0.5% LAMT 8 0.45% NCS 8 0.45% 8HGO 7 0.39% FNS 7 0.39% CHS 7 0.39% LAC 7 0.39% HPPR 7 0.39% SQS/FDFT1 7 0.39% CYP80B1 6 0.33% PMT 6 0.33% GES 6 0.33% DFR 6 0.33% F5H/CYP84A 6 0.33% CPD/CYP90A1 6 0.33% BR6OX1/CYP85A1 6 0.33% GGPPS 6 0.33% CCoAOMT 5 0.28% TAT 5 0.28% CPR 5 0.28% DET2 5 0.28% ISY 4 0.22% 7DLH 4 0.22% CYP90D1 4 0.22% IDI 4 0.22% ADC 3 0.17% CYP719 3 0.17% 6OMT_4OMT_SOMT 3 0.17% ANS/LDOX 3 0.17% CHI 3 0.17% CYP51G1 3 0.17% SMO1/SMO2 3 0.17% DXR 3 0.17% FPPS 3 0.17% DXS 3 0.17% BBE 2 0.11% XMT_MXMT_DXMT 2 0.11% MPO 2 0.11% FLS 2 0.11% DWF7 2 0.11% DWF1 2 0.11% ROT3/CYP90C1 2 0.11% HYD1 2 0.11% SQE 2 0.11% MDS/IspF 2 0.11% MVD 2 0.11% PMK 2 0.11% MVK 2 0.11% TDC 1 0.06% FK 1 0.06% DWF5 1 0.06% CPI1 1 0.06% HDS/IspG 1 0.06% HMGS 1 0.06% MCT/IspD 1 0.06% HMGR 1 0.06% CMK/IspE 1 0.06% HDR/IspH 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	146	19	BAHD (62)	View species results
Phenylpropanoid pathway	145	11	POD (60)	View species results
Alkaloid pathway	127	17	NMT (21)	View species results
Flavonoid pathway	98	10	UFGT (37)	View species results
Rosmarinic acid pathway	79	7	C4H (36)	View species results
Steroid pathway	38	14	CAS (10)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	662	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	154	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
Lrep1082720000990	Alkaloid	NMT	medium	borderline	NMT__00051__sp_Q96565_AMNMT_HORVV
Lrep1084410001060	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Lrep1095860001680	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Lrep1319400012180	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Lrep1370420013860	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Lrep1540450023090	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Lrep1582720029620	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Lrep1583520029810	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Lrep1597220032750	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Lrep1598950033500	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Lrep1602660035110	Alkaloid	NMT	low	borderline	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Lrep1616740038740	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
Lrep1655250072940	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Lrep1657430074300	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
Lrep1658350076870	Alkaloid	NMT	medium	borderline	NMT__00051__sp_Q96565_AMNMT_HORVV
Lrep1663640085270	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Lrep1664280086790	Alkaloid	NMT	medium	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Lrep1664460087910	Alkaloid	NMT	medium	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Lrep1665700090730	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Lrep1667350095450	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
Lrep1669130098780	Alkaloid	NMT	low	borderline	NMT__00066__sp_Q9SU94_ANM11_ARATH
Lrep1669150098870	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
Lrep1670390102610	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
Lrep1673210112510	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Lrep1673780115400	Alkaloid	NMT	low	borderline	NMT__00059__sp_Q9M571_PEAMT_SPIOL
Lrep1674000116910	Alkaloid	NMT	low	borderline	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Lrep1674030117250	Alkaloid	NMT	low	borderline	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Lrep1674160118250	Alkaloid	NMT	medium	borderline	NMT__00011__sp_A9X7L0_ANMT_RUTGR
Lrep1674470119320	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
Lrep1674670121060	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
Lrep1675370126280	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
Lrep1675510127780	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
Lrep1675760128450	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
Lrep1675830128890	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
Lrep1675830128950	Alkaloid	NMT	medium	pass	NMT__00032__sp_Q5PP37_ATXR2_ARATH
Lrep1676230131410	Alkaloid	NMT	medium	borderline	NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Lrep1676780135550	Alkaloid	NMT	low	borderline	NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Lrep1677050137590	Alkaloid	NMT	low	borderline	NMT__00019__sp_O22781_SUVH2_ARATH
Lrep1677070137960	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
Lrep1677460140550	Alkaloid	NMT	low	borderline	NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
Lrep1677630141910	Alkaloid	NMT	low	borderline	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Lrep1678030145070	Alkaloid	NMT	medium	pass	NMT__00035__sp_Q6K431_TRX1_ORYSJ
Lrep1678080145610	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
Lrep1678300148340	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Lrep1678670151630	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
Lrep1679500158500	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Lrep1679540159060	Alkaloid	NMT	low	borderline	NMT__00019__sp_O22781_SUVH2_ARATH
Lrep1680810172970	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Lrep1680900174680	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
Lrep1680900174980	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH