PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
SOpen02G0027640.1	solanum_pennellii	SOpen02G0027640.1
SOpen06G0020710.1	solanum_pennellii	SOpen06G0020710.1
SOpen08G0023780.1	solanum_pennellii	SOpen08G0023780.1
solanum_pimpinellifolium_SPIMP06g0194150	solanum_pimpinellifolium	solanum_pimpinellifolium_SPIMP06g0194150
solanum_pimpinellifolium_SPIMP08g0251840	solanum_pimpinellifolium	solanum_pimpinellifolium_SPIMP08g0251840
solanum_rostratum_evm.model.Chr12.2374	solanum_rostratum	solanum_rostratum_evm.model.Chr12.2374
solanum_rostratum_evm.model.Chr3.1673	solanum_rostratum	solanum_rostratum_evm.model.Chr3.1673
solanum_rostratum_evm.model.Chr8.717	solanum_rostratum	solanum_rostratum_evm.model.Chr8.717
solanum_sitiens_g15569.t1	solanum_sitiens	solanum_sitiens_g15569.t1
solanum_sitiens_g6125.t1	solanum_sitiens	solanum_sitiens_g6125.t1
solanum_stenotomum_XP_049382553.1	solanum_stenotomum	solanum_stenotomum_XP_049382553.1
solanum_stenotomum_XP_049397332.1	solanum_stenotomum	solanum_stenotomum_XP_049397332.1
solanum_stenotomum_XP_049410826.1	solanum_stenotomum	solanum_stenotomum_XP_049410826.1
solanum_stenotomum_XP_049410827.1	solanum_stenotomum	solanum_stenotomum_XP_049410827.1
solanum_stenotomum_XP_049415325.1	solanum_stenotomum	solanum_stenotomum_XP_049415325.1
Stub07G0016570.1	solanum_tuberosum	Stub07G0016570.1
sonneratia_alba_SA_26081	sonneratia_alba	sonneratia_alba_SA_26081
sonneratia_caseolaris_Sc2_12362	sonneratia_caseolaris	sonneratia_caseolaris_Sc2_12362
sonneratia_caseolaris_Sc2_27998	sonneratia_caseolaris	sonneratia_caseolaris_Sc2_27998
Sbic01G0045580.1	sorghum_bicolor	Sbic01G0045580.1
Sbic02G0040140.1	sorghum_bicolor	Sbic02G0040140.1
sparganium_stoloniferum_evm.model.Chr11.295	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr11.295
sparganium_stoloniferum_evm.model.Chr2.78	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr2.78
sparganium_stoloniferum_evm.model.Chr4.2295	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr4.2295
TKY65642.1	spatholobus_suberectus	TKY65642.1
TKY74110.1	spatholobus_suberectus	TKY74110.1
speranskia_yunnanensis_evm.model.ctg000620_np1212.1152	speranskia_yunnanensis	speranskia_yunnanensis_evm.model.ctg000620_np1212.1152
speranskia_yunnanensis_evm.model.ctg001420_np1212.1217	speranskia_yunnanensis	speranskia_yunnanensis_evm.model.ctg001420_np1212.1217
Sdon782110235810	sphaerocarpos_donnellii	Sdon782110235810
Sgircontig_5120185120	sphagnum_girgensohnii	Sgircontig_5120185120