PlantSME Plant secondary metabolism enzyme database

Rocc03G0012010.1 rubus_occidentalis

Protein ID: Rocc03G0012010.1
Record level: protein/isoform record
Species：Rubus occidentalis (rubus_occidentalis)
1
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family HDS/IspG
→
Library Terpenoid Official Library
→
Method blast+hmm
Annotation Details
Pathway Module Family Library Method
Terpenoid pathway Terpenoid portable pathway HDS/IspG Terpenoid Official Library blast+hmm
Protein Sequence
MATGAVPASFTGLKGRDTTLGFAKSMDFVRVSDLKRFKSGRTRISVIRNSNPGSDIAELKPASEGSPLLVPRQKYCESIH
KTVRRKTRTVMVGNVAIGSEHPIRIQTMTTSDTKDVTATVEEVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYN
IPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEKLEYTEDDYEKELEHIEQVESAFEFARICRKLDYHNFLFSM
KASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
NLGKRAADVQQGVAPFEEKHRHYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLDQLKTPELLYKSLAAKLVVG
MPFKDLATVDSILLRQLPPVDDDDSRLALKRLIDVSMGVITPLSEQLTKPLPNAMVLLFEYLGDNGLNFPVIHHIQFPSG
IHRDDLVIGAGANVGALLVDGLGDGLLLEAPDKDFDFIRNTSFNLLQGCRMRNTKTIAIMGCIVNGPGEMADADFGYVGG
APGKIDLYVGKNVVKRGIEMEHATDALIQLIKDHGRWVDPPAEE