PlantSME Plant secondary metabolism enzyme database

vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr06.ver1.0.g075530.p01 vitis_berlandieri_x_riparia

Protein ID: vitis_berlandieri_x_riparia_VITVixKober5BB_v1.0.hap_Vri.chr06.ver1.0.g075530.p01
Record level: protein/isoform record
Species：Vitis berlandieri x riparia (vitis_berlandieri_x_riparia)
1
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family HDS/IspG
→
Library Terpenoid Official Library
→
Method blast+hmm
Annotation Details
Pathway Module Family Library Method
Terpenoid pathway Terpenoid portable pathway HDS/IspG Terpenoid Official Library blast+hmm
Protein Sequence
MATGSVPTSFSGLRRMDCNLGSSKSVDFVRVSDMQRITYGRRKVSVIRNSNPSSDIAELQASSEGSPLLVPRQKYCESIH
KTVRRKTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAATVEQVMKIADKGADIVRITVQGKREADACFEIKNSLVQKNYN
IPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEKLEFTDEDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPIIMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGED
GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLANLGMKASDIQQGVAPFEEKHRHYFDFQRRTGQLPVQKEGE
EVDYRGVLHRDGSVLMSVSLDQLKTPELFYKSLAAKLVIGMPFKDLATVDSILLRELPPVDDNDARLTLKRLVDVSMGVI
TPLSEQLTKPLPNAMALVNLKELSTGAYKLLPEGTRLVVSVRGDEPYEDLEILKEVDATMILHDLPLTEEKISRVHSARR
LFEYLSDNALNFPVIHHIQFPKGIHRDDLVIGAGANAGALLVDGLGDGLLLEAPEQDFDFLRNTSFNLLQGCRMRNTKTE
YVSCPSCGRTLFDLQEISAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEHAT
DALIQLIKDHGRWVDPPAEE*