CAgraScaffold12250019430.1 capsella_grandiflora
Protein ID: CAgraScaffold12250019430.1
Record level: protein/isoform record
2
Assignments
Phylogenetic Position
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway
Alkaloid pathway
→
Module
Alkaloid portable pathway
→
Family
NMT
→
Library
Alkaloid Official Library
→
Method
blast+hmm
Pathway
Rosmarinic acid pathway
→
→
Family
TAT
→
Library
Rosmarinic acid Official Library
→
Method
blast
Annotation Details
| Pathway | Module | Family | Library | Method |
|---|---|---|---|---|
| Alkaloid pathway | Alkaloid portable pathway | NMT | Alkaloid Official Library | blast+hmm |
| Rosmarinic acid pathway | Rosmarinic acid portable pathway | TAT | Rosmarinic acid Official Library | blast |
Protein Sequence
MIIKRKFKTQIPSLKRCKLGNSATESRKKRKTNSGAYYYPLNLLGEIAAGIVPASGRNGFSASCCTGVSTKPVEVEESMP KRISDSGAVRDPPPSAEVSRPPLVRTSRGRIQVLPSRFNDSVLENWRKDSKSDCDLEEEVECRIEKVSHQGSKVGNLKNK QLDKSRKYSALYRETTFHELRGEARTSRVDRPREDEKIMKKEGSYGPENFYSGDLVWAKSGKKEPFWPAIVIDPMTQAPE LVLRSCIPDAACVVFFGHSGNENERDYAWVRRGLIFPFVDYVARFQEQSELEGCNPGDFQMALEEAFLADQGFTEKLMHD IHLAAGNPTFDDSFYRWIQETAVSNQDLDNNTPSQRLLKKYGNPLECVGCGTIISFEMAKKIKALVPGDQLLCKPCSRLT KSKHNCGICKKTRNHLDRQTWMRCHGCKVWVHAECDQISDKHLKDLGETDYYCPTCRAKFNFELSDSEKQNSKSKLSKGD GQMVLPDKVTVVCAGVEGIYFPRLHLVVCKCGSCGPKRKALSEWERHTGSKAKNWKTSVKVKSSKLALEEWMMKLAELHA NATAAKVPKRPSIKQRKQRLLSFLSETYEPVNAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVRDFTSW VCKACEKPDIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSIPSSNFVKICVICKQIHGS CTQCSKCSTYYHAMCASRAGYRMELHCLEKNGRQMTKMVSYCAYHRAPNPDNVLMIQTPSGVFSAKSLVQNKKRGGSRLI SSVREDDEESPTEDTVTCDPFSAARCRVFKRKINSKKRSEEEALPHHTKGPHHHPSAAIQTLNALRHVPEEPKSFSSFRE RLHHLQRTEMDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRGSIADLREARYRRVGKDCYLFKISEEVVVDATDK GNIARLINHSCTPNCYARIMSVGDEESRIVLIAKTNVAVEEELTYDYLFDPDEPEEFKVPCLCKAPNCRKFMN*