fragaria_nipponica_augustus_masked-chr3-processed-gene-26.72-mRNA-1 fragaria_nipponica
Protein ID: fragaria_nipponica_augustus_masked-chr3-processed-gene-26.72-mRNA-1
Record level: protein/isoform record
4
Assignments
Phylogenetic Position
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway
Phenylpropanoid pathway
→
→
Family
HCT
→
Library
Phenylpropanoid Official Library
→
Method
blast+hmm
Pathway
Rosmarinic acid pathway
→
→
Family
RAS
→
Library
Rosmarinic acid Official Library
→
Method
blast+hmm
Pathway
Terpenoid pathway
→
Module
Terpenoid portable pathway
→
Family
BAHD
→
Library
Terpenoid Official Library
→
Method
blast+hmm
Pathway
Alkaloid pathway
→
Module
Alkaloid portable pathway
→
Family
CYP80B1
→
Library
Alkaloid Official Library
→
Method
blast
Annotation Details
| Pathway | Module | Family | Library | Method |
|---|---|---|---|---|
| Phenylpropanoid pathway | Phenylpropanoid portable pathway | HCT | Phenylpropanoid Official Library | blast+hmm |
| Rosmarinic acid pathway | Rosmarinic acid portable pathway | RAS | Rosmarinic acid Official Library | blast+hmm |
| Terpenoid pathway | Terpenoid portable pathway | BAHD | Terpenoid Official Library | blast+hmm |
| Alkaloid pathway | Alkaloid portable pathway | CYP80B1 | Alkaloid Official Library | blast |
Protein Sequence
MAVSISVRESTIVKPAEETPRQLLWMSNLDMTSINAHTPTVYIYKPKDGADNFFDPSVLKDALSKALVPFYPLAGRLQRN NDDKNGRIEINCNAEGVLFVVADSTSCADDFTDLKTCLKLGKCLIPAVDYSAGISSYPLFVVQVTYLKCGGVALGIGFEH NTADGFAALDFVKAWSEMARGVDLAIPPTLDRTLLRARDPPQPLPNNNHHVEYRPQAPVTKPAAVASDPGDDTATVSVFN FTREHINLLKAKCLPEKDADNGDNSSVKYTSYEVFAAHVWRSACKARQLADDEVSHLRTATNGRSRLQPPLPPRYFGNVI FSCVVTARAGDLLSKPLSYAVSCIHKALLRMDDEYLRSALDYLELQKSQTHLSSLTRGSSYYKSPNLGITSWVTLPIYDA DFGWGRPVFMGRAGLSLEGKAYTVPSASGDGSFSLAISLQSRHMDSFSKLIYDI*