PlantSME Plant secondary metabolism enzyme database

fragaria_nipponica_augustus_masked-chr3-processed-gene-437.32-mRNA-1 fragaria_nipponica

Protein ID: fragaria_nipponica_augustus_masked-chr3-processed-gene-437.32-mRNA-1
Record level: protein/isoform record
Species：Fragaria nipponica (fragaria_nipponica)
1
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Alkaloid pathway
→
Module Alkaloid portable pathway
→
Family TYDC_DDC
→
Library Alkaloid Official Library
→
Method blast+hmm
Annotation Details
Pathway Module Family Library Method
Alkaloid pathway Alkaloid portable pathway TYDC_DDC Alkaloid Official Library blast+hmm
Protein Sequence
MGSLEFHHVPEKTNSDPPMANPMDPEEFRRQGHIMIDFIADYYKNIEKYPVLSQVQPGYLKKLLPESAPYNPEPIETILQ
DVQDHIVPGITHWQSPSYFAYFPSSGSIAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWLGDMLQLPKSFLFSGNG
GGVLQGTTCEAIVCTMAAARDQMLSRIGKDNIGKLVVYGSDQTHSALKKASQIVGIHPNNFRAIKTTKSTEFALSPELLR
STICSDIDKGLVPLFLCATMGTTATTSVDPLRGLCDVAKDYDLWVHVDAAYAGSICICPEFRHFIEGVEGANSFSFNAHK
WFFTTLDCCCLWVKNPTALINSLSTNPEFLRNKASDSKQVVDYKDWQVALSRRFRALKLWLVLRSYGVANLRSFLRSHVK
MAEVFEKLVRENKWFEVVVPRNFAMVCFRISPSAIRKSPIDDDGNDVEINEVNSKLLEAINTSGSVYMTHAVVGGMYVLR
CAIGATLTEEKHILMAWKVVQDQAEAILSTYH*