PlantSME Plant secondary metabolism enzyme database

fragaria_nipponica_maker-chr3-augustus-gene-176.62-mRNA-1 fragaria_nipponica

Protein ID: fragaria_nipponica_maker-chr3-augustus-gene-176.62-mRNA-1
Record level: protein/isoform record
Species：Fragaria nipponica (fragaria_nipponica)
1
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family HDS/IspG
→
Library Terpenoid Official Library
→
Method blast+hmm
Annotation Details
Pathway Module Family Library Method
Terpenoid pathway Terpenoid portable pathway HDS/IspG Terpenoid Official Library blast+hmm
Protein Sequence
MATGAVPASFTGLTGRETTLGFTKSMDFVRVSDLKRFKSGRTRISVIRNSNPGSDTAELKPASEGSPLLVPRQKYCESIH
KTVRRKTRTVMVGNVAIGSEHPIRIQTMTTSDTKDVSATVEEVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYN
IPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEKLEYTEEDYEKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGED
GRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCKRLANLGMRAADLQQGVAPFEEKHRHYFDFQRRSGQLPMQKEGD
EVDYRGVLHRDGSVLMSVSLDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRQLPPVDDDDSRLALKRLIDVSMGVI
TPLSEQLTKPLPNAMVLVNTKELSTGAYKLLPEGTRLVVSLRGDEPYEVLDLIKGLDITMLLHDLPYSEDKISRVHAARR
LFEYLGDNGLNYPVIHHIQFPSGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPDKDFDFIRNTSFNLLQGCRMRNTKTE
YVSCPSCGRTLFDLQEISAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRAIEMEHAT
DALIQLIKDHGRWVDPPAEE*