PlantSME Plant secondary metabolism enzyme database

fragaria_nubicola_evm.model.ctg11.31 fragaria_nubicola

Protein ID: fragaria_nubicola_evm.model.ctg11.31
Record level: protein/isoform record
Species：Fragaria nubicola (fragaria_nubicola)
1
Assignments
Phylogenetic Position
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Annotation Path
Each assignment is summarized in the order Pathway -> Module -> Family -> Library -> Method.
Pathway Terpenoid pathway
→
Module Terpenoid portable pathway
→
Family HDS/IspG
→
Library Terpenoid Official Library
→
Method blast+hmm
Annotation Details
Pathway Module Family Library Method
Terpenoid pathway Terpenoid portable pathway HDS/IspG Terpenoid Official Library blast+hmm
Protein Sequence
MATGAVPASFTGLTGRETTLGFTKSMDFVRVSDLKRFKSGRTRISVIRNSNPGSDTAELKPASEGSPLLVPRQKYCESIH
KTVRRKTRTVMVGNVAIGSEHPIRIQTMTTSDTKDVSATVEEVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYN
IPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEKLEYTEEDYEKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGED
GRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCKRLANLGMRAADLQQGVAPFEEKHRHYFDFQRRSGQLPLQKEGD
EVDYRGVLHRDGSVLMSVSLDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRQLPPVDDDDSRLALKRLIDVSMGVI
TPLSEQLTKPLPNAMVLVNTKELSTGAYKLLPEGSRLVVSLRGDEPYEVLDLIKGLDITMLLHDLPYSEDKISRVHAARR
LFEYLGDNGLNYPVIHHIQFPSGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPDKDFDFIRNTSFNLLQGCRMRNTKTE
YVSCPSCGRTLFDLQEISAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRAIEMEHAT
DALIQLIKDHGRWVDPPAEE*