PlantSME Plant secondary metabolism enzyme database

Abrus precatorius (abrus_precatorius)

Imported from atlas release summary for Abrus precatorius.

2363
Candidate Protein Records
1947
Pathway-Level Records
4606
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 28.3% Alkaloid pathway 23.16% Phenylpropanoid pathway 21.01% Flavonoid pathway 12.17% Rosmarinic acid pathway 7.81% Steroid pathway 7.55%
Family Distribution
BAHD 6.49% C3'H/CYP98A 5.43% C4H 5.08% 4CL 4.88% POD 3.91% UFGT 3.71% F3H 3.65% UGT 3.63%
Other Families 63.22%
More Families (95)
IFS 165 3.58% 7DLGT 163 3.54% T3O 162 3.52% CYP76 149 3.23% NMT 148 3.21% STR 114 2.48% CODM/T6ODM 104 2.26% SMT1/SMT2/SMT3 81 1.76% TRI/TRII 79 1.72% BR6OX2/CYP85A2 78 1.69% F3'H/CYP75B 76 1.65% CAS 76 1.65% CAD 73 1.58% H6H 69 1.5% DWF4/CYP90B1 68 1.48% CYP71 62 1.35% LAC 56 1.22% IFR 51 1.11% COMT 50 1.09% CYP90D1 49 1.06% GES 47 1.02% TPS 47 1.02% SGD 41 0.89% CSE 40 0.87% PYKS 37 0.8% HCT 36 0.78% GS 34 0.74% PMT 31 0.67% RAS 30 0.65% COR 29 0.63% 16OMT 29 0.63% IO 26 0.56% T16H 26 0.56% SLS 25 0.54% CCR 23 0.5% TAT 23 0.5% ANR 22 0.48% PAL 21 0.46% ROT3/CYP90C1 21 0.46% BR6OX1/CYP85A1 20 0.43% CPR 19 0.41% BBE 18 0.39% FNS 18 0.39% 8HGO 17 0.37% NCS 17 0.37% 7DLH 16 0.35% G8O/G8H 16 0.35% MPO 15 0.33% CNMT 15 0.33% CYP51G1 15 0.33% SQS/FDFT1 14 0.3% ANS/LDOX 13 0.28% CCoAOMT 13 0.28% CPD/CYP90A1 13 0.28% F3'5'H/CYP75A 12 0.26% AACT 12 0.26% LAMT 11 0.24% DFR 11 0.24% GGPPS 11 0.24% CHS 10 0.22% DET2 10 0.22% SQE 10 0.22% DXS 10 0.22% F5H/CYP84A 9 0.2% ISY 8 0.17% FPPS 8 0.17% HPPR 7 0.15% FK 7 0.15% CHI 6 0.13% MCT/IspD 6 0.13% HMGS 6 0.13% SMO1/SMO2 5 0.11% MVK 5 0.11% HDS/IspG 5 0.11% TDC 4 0.09% TYDC_DDC 4 0.09% CYP719 4 0.09% MVD 4 0.09% HMGR 3 0.07% CMK/IspE 3 0.07% CYP80F1 2 0.04% ADC 2 0.04% CPI1 2 0.04% DWF1 2 0.04% HDR/IspH 2 0.04% PMK 2 0.04% XMT_MXMT_DXMT 1 0.02% CYP80B1 1 0.02% ODC 1 0.02% DWF5 1 0.02% DWF7 1 0.02% HYD1 1 0.02% DXR 1 0.02% IDI 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 551 19 BAHD (241) View species results
Alkaloid pathway 451 19 NMT (82) View species results
Phenylpropanoid pathway 409 11 POD (176) View species results
Flavonoid pathway 237 8 UFGT (160) View species results
Rosmarinic acid pathway 152 7 C4H (61) View species results
Steroid pathway 147 12 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1499 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 365 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Protein/Isoform Record Pathway Family Confidence Status Best Target
XP_027364703.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027365607.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027366870.1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
XP_027366945.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027367163.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027367780.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027367781.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027367782.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027368615.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027368808.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
XP_027368810.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
XP_027368811.1 Alkaloid STR medium pass STR__00002__sp_P68175_STSY_RAUSE
XP_027369102.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
XP_027369103.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR