PlantSME Plant secondary metabolism enzyme database

Acacia pycnantha (acacia_pycnantha)

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Imported from atlas release summary for Acacia pycnantha.

2711
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.47% Alkaloid pathway 22.43% Phenylpropanoid pathway 18.7% Flavonoid pathway 12.98% Rosmarinic acid pathway 9.11% Steroid pathway 6.31%
Family Distribution
C4H 6.5% C3'H/CYP98A 6.12% BAHD 5.18% UGT 4.07% CYP76 3.94% IFS 3.86% 7DLGT 3.68% UFGT 3.65%
Other Families 63.02%
More Families (97)
T3O 255 3.58% F3H 253 3.55% POD 183 2.57% DWF4/CYP90B1 178 2.5% CODM/T6ODM 159 2.23% 4CL 156 2.19% CAD 155 2.17% F3'H/CYP75B 153 2.15% H6H 136 1.91% BR6OX2/CYP85A2 135 1.89% CYP71 134 1.88% NMT 118 1.66% STR 104 1.46% TPS 101 1.42% CAS 99 1.39% GES 94 1.32% COMT 89 1.25% TRI/TRII 83 1.16% SMT1/SMT2/SMT3 81 1.14% T16H 79 1.11% G8O/G8H 71 1.0% ANR 70 0.98% CSE 66 0.93% 16OMT 62 0.87% PYKS 61 0.86% LAC 59 0.83% HCT 57 0.8% RAS 52 0.73% SLS 51 0.72% CYP90D1 51 0.72% IFR 50 0.7% F3'5'H/CYP75A 49 0.69% BBE 48 0.67% F5H/CYP84A 47 0.66% CYP51G1 46 0.65% IO 43 0.6% GS 42 0.59% LAMT 40 0.56% SGD 37 0.52% TAT 37 0.52% COR 36 0.51% NCS 35 0.49% CCR 35 0.49% PMT 34 0.48% FNS 33 0.46% PAL 33 0.46% 8HGO 30 0.42% 7DLH 29 0.41% ANS/LDOX 29 0.41% BR6OX1/CYP85A1 29 0.41% CPD/CYP90A1 28 0.39% DXS 26 0.36% DFR 23 0.32% CHS 19 0.27% AACT 18 0.25% HPPR 14 0.2% 6OMT_4OMT_SOMT 13 0.18% TDC 13 0.18% FPPS 13 0.18% CYP80B1 12 0.17% CCoAOMT 12 0.17% CPR 12 0.17% CNMT 10 0.14% SQS/FDFT1 10 0.14% SMO1/SMO2 10 0.14% SQE 10 0.14% ROT3/CYP90C1 10 0.14% GGPPS 9 0.13% MPO 8 0.11% FLS 8 0.11% DET2 8 0.11% ISY 7 0.1% XMT_MXMT_DXMT 7 0.1% TYDC_DDC 7 0.1% HMGR 7 0.1% CHI 6 0.08% HDR/IspH 6 0.08% DXR 5 0.07% MCT/IspD 5 0.07% CYP80F1 4 0.06% CYP719 4 0.06% CPI1 4 0.06% HMGS 4 0.06% MVK 4 0.06% MVD 4 0.06% DWF1 3 0.04% PMK 3 0.04% CMK/IspE 3 0.04% HDS/IspG 3 0.04% DWF7 2 0.03% FK 2 0.03% DWF5 2 0.03% HYD1 2 0.03% IDI 2 0.03% ODC 1 0.01% ADC 1 0.01% MDS/IspF 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 20 BAHD (289) View species results
Alkaloid pathway 608 24 7DLGT (145) View species results
Phenylpropanoid pathway 507 12 POD (166) View species results
Flavonoid pathway 352 15 UFGT (242) View species results
Rosmarinic acid pathway 247 7 C4H (123) View species results
Steroid pathway 171 12 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2863 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 478 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
acacia_pycnantha_KAI9124495.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
acacia_pycnantha_KAI9125161.1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
acacia_pycnantha_KAI9125723.1 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
acacia_pycnantha_KAI9126072.1 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
acacia_pycnantha_KAI9127877.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
acacia_pycnantha_KAI9128604.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY