Acer yangbiense (acer_yangbiense)
Imported from atlas release summary for Acer yangbiense.
1963
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1963
Candidate Genes
C4H
7.06%
C3'H/CYP98A
6.52%
UGT
5.75%
7DLGT
5.46%
UFGT
5.03%
IFS
4.25%
CYP76
4.25%
BAHD
4.01%
Other Families
57.67%
More Families (97)
T3O
201
3.93%
4CL
141
2.76%
POD
141
2.76%
DWF4/CYP90B1
137
2.68%
F3H
115
2.25%
F3'H/CYP75B
110
2.15%
BR6OX2/CYP85A2
108
2.11%
CYP71
98
1.92%
CAD
93
1.82%
CAS
88
1.72%
CODM/T6ODM
83
1.62%
NMT
76
1.49%
STR
67
1.31%
GES
62
1.21%
TPS
62
1.21%
BBE
60
1.17%
TRI/TRII
56
1.1%
T16H
52
1.02%
LAC
50
0.98%
SMT1/SMT2/SMT3
50
0.98%
H6H
47
0.92%
CYP90D1
47
0.92%
CSE
45
0.88%
GS
42
0.82%
IFR
40
0.78%
G8O/G8H
39
0.76%
PYKS
37
0.72%
PAL
36
0.7%
COMT
36
0.7%
IO
35
0.68%
SGD
34
0.67%
F5H/CYP84A
33
0.65%
7DLH
32
0.63%
F3'5'H/CYP75A
30
0.59%
HCT
28
0.55%
CYP51G1
27
0.53%
FNS
26
0.51%
BR6OX1/CYP85A1
23
0.45%
16OMT
22
0.43%
PMT
21
0.41%
CCR
21
0.41%
CPD/CYP90A1
21
0.41%
RAS
20
0.39%
DFR
19
0.37%
ANR
19
0.37%
NCS
18
0.35%
SLS
15
0.29%
LAMT
14
0.27%
ANS/LDOX
14
0.27%
ISY
12
0.23%
MPO
12
0.23%
CNMT
12
0.23%
8HGO
12
0.23%
CYP719
12
0.23%
CHS
12
0.23%
HPPR
12
0.23%
COR
11
0.22%
FPPS
11
0.22%
GGPPS
11
0.22%
TAT
10
0.2%
TYDC_DDC
9
0.18%
CYP80B1
8
0.16%
SQS/FDFT1
8
0.16%
ROT3/CYP90C1
8
0.16%
AACT
8
0.16%
XMT_MXMT_DXMT
7
0.14%
CPR
7
0.14%
SMO1/SMO2
6
0.12%
SQE
6
0.12%
DET2
5
0.1%
DXS
5
0.1%
HMGR
5
0.1%
CCoAOMT
4
0.08%
MVK
4
0.08%
ODC
3
0.06%
CHI
3
0.06%
MVD
3
0.06%
CYP80F1
2
0.04%
6OMT_4OMT_SOMT
2
0.04%
FLS
2
0.04%
DWF1
2
0.04%
DWF7
2
0.04%
FK
2
0.04%
CMK/IspE
2
0.04%
HMGS
2
0.04%
PMK
2
0.04%
MCT/IspD
2
0.04%
ADC
1
0.02%
TDC
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
HYD1
1
0.02%
HDS/IspG
1
0.02%
GPPS
1
0.02%
DXR
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 573 | 18 | UGT (255) | View species results |
| Alkaloid pathway | 410 | 23 | 7DLGT (109) | View species results |
| Phenylpropanoid pathway | 360 | 12 | POD (123) | View species results |
| Flavonoid pathway | 328 | 12 | UFGT (237) | View species results |
| Rosmarinic acid pathway | 174 | 7 | C4H (92) | View species results |
| Steroid pathway | 118 | 11 | CAS (62) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2166 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 253 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Acyan10G0136400.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan11G0076500.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan11G0148100.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Acyan11G0173900.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0048800.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0049000.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0079500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0085600.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0085800.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0093500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0108200.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0108300.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0108600.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0124000.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan12G0124100.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Acyan13G0063100.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| AcyanUnG0036500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |