PlantSME Plant secondary metabolism enzyme database

Acorus americanus (acorus_americanus)

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Imported from atlas release summary for Acorus americanus.

1526
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.31% Phenylpropanoid pathway 22.61% Alkaloid pathway 21.82% Flavonoid pathway 11.99% Rosmarinic acid pathway 8.72% Steroid pathway 6.55%
Family Distribution
C4H 6.9% C3'H/CYP98A 6.68% BAHD 5.01% CYP76 4.6% POD 4.16% IFS 3.91% 4CL 3.48% T3O 3.39%
Other Families 61.88%
More Families (96)
UGT 115 3.15% 7DLGT 110 3.01% UFGT 106 2.9% DWF4/CYP90B1 86 2.35% BR6OX2/CYP85A2 86 2.35% F3'H/CYP75B 79 2.16% F3H 75 2.05% NMT 70 1.92% TPS 63 1.72% GES 58 1.59% CAD 58 1.59% TRI/TRII 57 1.56% CAS 57 1.56% STR 56 1.53% COMT 53 1.45% SMT1/SMT2/SMT3 52 1.42% CYP71 46 1.26% 16OMT 44 1.2% PYKS 40 1.09% LAC 40 1.09% G8O/G8H 39 1.07% IFR 38 1.04% IO 37 1.01% T16H 32 0.88% CODM/T6ODM 32 0.88% CSE 32 0.88% FNS 30 0.82% NCS 29 0.79% H6H 28 0.77% GS 28 0.77% CYP90D1 27 0.74% 7DLH 25 0.68% HCT 25 0.68% CPD/CYP90A1 25 0.68% BR6OX1/CYP85A1 23 0.63% SGD 22 0.6% F5H/CYP84A 22 0.6% 8HGO 21 0.57% F3'5'H/CYP75A 21 0.57% CCR 21 0.57% SLS 20 0.55% RAS 20 0.55% COR 19 0.52% TAT 19 0.52% ANR 16 0.44% PAL 15 0.41% LAMT 14 0.38% CHS 14 0.38% CYP51G1 14 0.38% PMT 12 0.33% ROT3/CYP90C1 10 0.27% TYDC_DDC 9 0.25% CNMT 9 0.25% CYP719 9 0.25% DFR 9 0.25% CCoAOMT 8 0.22% CPR 8 0.22% MPO 7 0.19% ANS/LDOX 7 0.19% GGPPS 7 0.19% MVD 6 0.16% AACT 6 0.16% 6OMT_4OMT_SOMT 5 0.14% BBE 5 0.14% ISY 5 0.14% CYP80B1 5 0.14% HPPR 5 0.14% SQS/FDFT1 5 0.14% SMO1/SMO2 5 0.14% DXS 5 0.14% XMT_MXMT_DXMT 4 0.11% DET2 4 0.11% MVK 4 0.11% FPPS 4 0.11% HDR/IspH 4 0.11% CHI 3 0.08% SQE 3 0.08% HMGS 3 0.08% MCT/IspD 3 0.08% TDC 2 0.05% DWF7 2 0.05% FK 2 0.05% HDS/IspG 2 0.05% MDS/IspF 2 0.05% HMGR 2 0.05% ADC 1 0.03% ODC 1 0.03% CYP80F1 1 0.03% DWF5 1 0.03% CPI1 1 0.03% HYD1 1 0.03% DWF1 1 0.03% IDI 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 432 19 BAHD (136) View species results
Phenylpropanoid pathway 345 11 POD (147) View species results
Alkaloid pathway 333 23 TRI/TRII (52) View species results
Flavonoid pathway 183 11 UFGT (104) View species results
Rosmarinic acid pathway 133 7 C4H (64) View species results
Steroid pathway 100 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 228 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
acorus_americanus_Acora.08G062400.1.p Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
acorus_americanus_Acora.08G063100.1.p Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
acorus_americanus_Acora.08G114000.1.p Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
acorus_americanus_Acora.08G118200.1.p Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
acorus_americanus_Acora.08G192000.1.p Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
acorus_americanus_Acora.08G200200.1.p Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
acorus_americanus_Acora.09G063600.1.p Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
acorus_americanus_Acora.09G122800.1.p Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
acorus_americanus_Acora.09G182900.1.p Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
acorus_americanus_Acora.10G020700.1.p Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
acorus_americanus_Acora.10G067700.1.p Alkaloid NMT low borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
acorus_americanus_Acora.10G145700.1.p Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
acorus_americanus_Acora.10G155500.1.p Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
acorus_americanus_Acora.10G160800.1.p Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
acorus_americanus_Acora.10G161700.1.p Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
acorus_americanus_Acora.11G070100.1.p Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
acorus_americanus_Acora.12G129100.1.p Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
acorus_americanus_Acora.12G156400.1.p Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
acorus_americanus_Acora.M057400.1.p Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
acorus_americanus_Acora.M078100.1.p Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH