Alstonia scholaris (alstonia_scholaris)
Imported from atlas release summary for Alstonia scholaris.
2105
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2105
Candidate Genes
C4H
7.1%
C3'H/CYP98A
5.48%
UGT
4.77%
BAHD
4.66%
CYP76
4.31%
7DLGT
4.17%
UFGT
3.44%
POD
3.4%
Other Families
62.68%
More Families (94)
IFS
184
3.35%
4CL
165
3.0%
NMT
138
2.51%
T3O
137
2.49%
F3H
128
2.33%
F3'H/CYP75B
117
2.13%
CAD
99
1.8%
DWF4/CYP90B1
98
1.78%
STR
95
1.73%
BR6OX2/CYP85A2
95
1.73%
CYP71
94
1.71%
T16H
90
1.64%
CODM/T6ODM
88
1.6%
H6H
86
1.56%
G8O/G8H
84
1.53%
GS
76
1.38%
TRI/TRII
68
1.24%
FNS
67
1.22%
SMT1/SMT2/SMT3
60
1.09%
LAC
56
1.02%
HCT
56
1.02%
SGD
53
0.96%
F3'5'H/CYP75A
53
0.96%
F5H/CYP84A
53
0.96%
CYP90D1
53
0.96%
CSE
50
0.91%
TPS
50
0.91%
IO
49
0.89%
IFR
49
0.89%
CAS
44
0.8%
COMT
43
0.78%
GES
42
0.76%
RAS
41
0.75%
SLS
37
0.67%
PYKS
37
0.67%
BBE
33
0.6%
TAT
33
0.6%
NCS
32
0.58%
ANS/LDOX
32
0.58%
ANR
32
0.58%
PMT
27
0.49%
PAL
27
0.49%
8HGO
26
0.47%
COR
26
0.47%
CPD/CYP90A1
26
0.47%
BR6OX1/CYP85A1
25
0.45%
7DLH
23
0.42%
CYP51G1
20
0.36%
CYP80B1
19
0.35%
CCoAOMT
19
0.35%
CNMT
18
0.33%
CCR
18
0.33%
DFR
16
0.29%
CYP719
14
0.25%
GGPPS
14
0.25%
16OMT
13
0.24%
SQE
13
0.24%
CPR
12
0.22%
FPPS
12
0.22%
AACT
12
0.22%
SQS/FDFT1
11
0.2%
XMT_MXMT_DXMT
10
0.18%
LAMT
9
0.16%
ROT3/CYP90C1
9
0.16%
MPO
8
0.15%
ISY
8
0.15%
TYDC_DDC
8
0.15%
FLS
8
0.15%
CHS
8
0.15%
DXS
8
0.15%
CHI
7
0.13%
MVK
7
0.13%
MCT/IspD
6
0.11%
ADC
5
0.09%
SMO1/SMO2
5
0.09%
MVD
5
0.09%
CYP80F1
4
0.07%
TDC
4
0.07%
HPPR
4
0.07%
DET2
4
0.07%
HMGR
4
0.07%
HYD1
3
0.05%
HDR/IspH
3
0.05%
6OMT_4OMT_SOMT
2
0.04%
FK
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDS/IspG
2
0.04%
DXR
2
0.04%
DWF7
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 626 | 17 | UGT (220) | View species results |
| Alkaloid pathway | 507 | 26 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 454 | 13 | POD (164) | View species results |
| Flavonoid pathway | 254 | 16 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (50) | View species results |
| Steroid pathway | 106 | 12 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2212 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 353 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| alstonia_scholaris_tjs27115 | Alkaloid | NMT | medium | borderline | NMT__00052__sp_Q9AVJ9_MXMT1_COFAR |
| alstonia_scholaris_tjs27331 | Alkaloid | NMT | low | borderline | NMT__00010__sp_A4GE70_DXMT1_COFCA |
| alstonia_scholaris_tjs27400 | Alkaloid | NMT | medium | pass | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| alstonia_scholaris_tjs27401 | Alkaloid | NMT | medium | pass | NMT__00070__sp_W5U2K2_NMT_CATRO |
| alstonia_scholaris_tjs27521 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| alstonia_scholaris_tjs27562 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| alstonia_scholaris_tjs27802 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| alstonia_scholaris_tjs27858 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| alstonia_scholaris_tjs28649 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| alstonia_scholaris_tjs29112 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| alstonia_scholaris_tjs29376 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| alstonia_scholaris_tjs31842 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| alstonia_scholaris_tjs32401 | Alkaloid | NMT | low | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| alstonia_scholaris_tjs32864 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| alstonia_scholaris_tjs33279 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| alstonia_scholaris_tjs33557 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| alstonia_scholaris_tjs33587 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| alstonia_scholaris_tjs33629 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| alstonia_scholaris_tjs34230 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| alstonia_scholaris_tjs34298 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| alstonia_scholaris_tjs34557 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| alstonia_scholaris_tjs34637 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| alstonia_scholaris_tjs34638 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| alstonia_scholaris_tjs35036.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| alstonia_scholaris_tjs35271 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| alstonia_scholaris_tjs35684 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| alstonia_scholaris_tjs36066 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| alstonia_scholaris_tjs36130 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| alstonia_scholaris_tjs36482 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| alstonia_scholaris_tjs37038 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| alstonia_scholaris_tjs37193 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| alstonia_scholaris_tjs37375 | Alkaloid | NMT | medium | borderline | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| alstonia_scholaris_tjs37566 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| alstonia_scholaris_tjs37567 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| alstonia_scholaris_tjs37568 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| alstonia_scholaris_tjs37575 | Alkaloid | NMT | low | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| alstonia_scholaris_tjs37576 | Alkaloid | NMT | medium | pass | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| alstonia_scholaris_tjs37641 | Alkaloid | NMT | medium | pass | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |