Alstonia scholaris (alstonia_scholaris)
Imported from atlas release summary for Alstonia scholaris.
2105
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2105
Candidate Genes
C4H
7.1%
C3'H/CYP98A
5.48%
UGT
4.77%
BAHD
4.66%
CYP76
4.31%
7DLGT
4.17%
UFGT
3.44%
POD
3.4%
Other Families
62.68%
More Families (94)
IFS
184
3.35%
4CL
165
3.0%
NMT
138
2.51%
T3O
137
2.49%
F3H
128
2.33%
F3'H/CYP75B
117
2.13%
CAD
99
1.8%
DWF4/CYP90B1
98
1.78%
STR
95
1.73%
BR6OX2/CYP85A2
95
1.73%
CYP71
94
1.71%
T16H
90
1.64%
CODM/T6ODM
88
1.6%
H6H
86
1.56%
G8O/G8H
84
1.53%
GS
76
1.38%
TRI/TRII
68
1.24%
FNS
67
1.22%
SMT1/SMT2/SMT3
60
1.09%
LAC
56
1.02%
HCT
56
1.02%
SGD
53
0.96%
F3'5'H/CYP75A
53
0.96%
F5H/CYP84A
53
0.96%
CYP90D1
53
0.96%
CSE
50
0.91%
TPS
50
0.91%
IO
49
0.89%
IFR
49
0.89%
CAS
44
0.8%
COMT
43
0.78%
GES
42
0.76%
RAS
41
0.75%
SLS
37
0.67%
PYKS
37
0.67%
BBE
33
0.6%
TAT
33
0.6%
NCS
32
0.58%
ANS/LDOX
32
0.58%
ANR
32
0.58%
PMT
27
0.49%
PAL
27
0.49%
8HGO
26
0.47%
COR
26
0.47%
CPD/CYP90A1
26
0.47%
BR6OX1/CYP85A1
25
0.45%
7DLH
23
0.42%
CYP51G1
20
0.36%
CYP80B1
19
0.35%
CCoAOMT
19
0.35%
CNMT
18
0.33%
CCR
18
0.33%
DFR
16
0.29%
CYP719
14
0.25%
GGPPS
14
0.25%
16OMT
13
0.24%
SQE
13
0.24%
CPR
12
0.22%
FPPS
12
0.22%
AACT
12
0.22%
SQS/FDFT1
11
0.2%
XMT_MXMT_DXMT
10
0.18%
LAMT
9
0.16%
ROT3/CYP90C1
9
0.16%
MPO
8
0.15%
ISY
8
0.15%
TYDC_DDC
8
0.15%
FLS
8
0.15%
CHS
8
0.15%
DXS
8
0.15%
CHI
7
0.13%
MVK
7
0.13%
MCT/IspD
6
0.11%
ADC
5
0.09%
SMO1/SMO2
5
0.09%
MVD
5
0.09%
CYP80F1
4
0.07%
TDC
4
0.07%
HPPR
4
0.07%
DET2
4
0.07%
HMGR
4
0.07%
HYD1
3
0.05%
HDR/IspH
3
0.05%
6OMT_4OMT_SOMT
2
0.04%
FK
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDS/IspG
2
0.04%
DXR
2
0.04%
DWF7
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 626 | 17 | UGT (220) | View species results |
| Alkaloid pathway | 507 | 26 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 454 | 13 | POD (164) | View species results |
| Flavonoid pathway | 254 | 16 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (50) | View species results |
| Steroid pathway | 106 | 12 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2212 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 353 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| alstonia_scholaris_tjs00595 | Phenylpropanoid | POD | low | borderline | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| alstonia_scholaris_tjs00616 | Phenylpropanoid | POD | low | borderline | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| alstonia_scholaris_tjs00741 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| alstonia_scholaris_tjs00778 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs00779 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs00918 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| alstonia_scholaris_tjs00987 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| alstonia_scholaris_tjs01331 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs01393 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs01489 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs01843 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs02240 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs03401.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| alstonia_scholaris_tjs03653 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| alstonia_scholaris_tjs03774 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| alstonia_scholaris_tjs04293 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs04952 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs05009 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs05187 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| alstonia_scholaris_tjs05295 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs05352 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs05583 | Phenylpropanoid | POD | low | borderline | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| alstonia_scholaris_tjs05899 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| alstonia_scholaris_tjs06041 | Phenylpropanoid | POD | medium | pass | POD__00014__sp_Q4W1I9_PER2_ZINEL |
| alstonia_scholaris_tjs06456 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| alstonia_scholaris_tjs06511 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs06649 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| alstonia_scholaris_tjs06865 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs06878 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| alstonia_scholaris_tjs07334 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| alstonia_scholaris_tjs07380 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| alstonia_scholaris_tjs07802 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| alstonia_scholaris_tjs08068 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| alstonia_scholaris_tjs08076 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| alstonia_scholaris_tjs08244 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| alstonia_scholaris_tjs08289 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| alstonia_scholaris_tjs08300 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs08463 | Phenylpropanoid | POD | low | borderline | POD__00010__sp_P84516_PER1_SORBI |
| alstonia_scholaris_tjs08606 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08608 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08609 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08611 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08612 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08613 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08882 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08883 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08940 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs08941 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| alstonia_scholaris_tjs09345 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| alstonia_scholaris_tjs09802 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |