Alstonia scholaris (alstonia_scholaris)
Imported from atlas release summary for Alstonia scholaris.
2625
Candidate Protein Records
2105
Pathway-Level Records
5496
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5496
Family-Level Calls
C4H
7.1%
C3'H/CYP98A
5.48%
UGT
4.77%
BAHD
4.66%
CYP76
4.31%
7DLGT
4.17%
UFGT
3.44%
POD
3.4%
Other Families
62.68%
More Families (94)
IFS
184
3.35%
4CL
165
3.0%
NMT
138
2.51%
T3O
137
2.49%
F3H
128
2.33%
F3'H/CYP75B
117
2.13%
CAD
99
1.8%
DWF4/CYP90B1
98
1.78%
STR
95
1.73%
BR6OX2/CYP85A2
95
1.73%
CYP71
94
1.71%
T16H
90
1.64%
CODM/T6ODM
88
1.6%
H6H
86
1.56%
G8O/G8H
84
1.53%
GS
76
1.38%
TRI/TRII
68
1.24%
FNS
67
1.22%
SMT1/SMT2/SMT3
60
1.09%
LAC
56
1.02%
HCT
56
1.02%
SGD
53
0.96%
F3'5'H/CYP75A
53
0.96%
F5H/CYP84A
53
0.96%
CYP90D1
53
0.96%
CSE
50
0.91%
TPS
50
0.91%
IO
49
0.89%
IFR
49
0.89%
CAS
44
0.8%
COMT
43
0.78%
GES
42
0.76%
RAS
41
0.75%
SLS
37
0.67%
PYKS
37
0.67%
BBE
33
0.6%
TAT
33
0.6%
NCS
32
0.58%
ANS/LDOX
32
0.58%
ANR
32
0.58%
PMT
27
0.49%
PAL
27
0.49%
8HGO
26
0.47%
COR
26
0.47%
CPD/CYP90A1
26
0.47%
BR6OX1/CYP85A1
25
0.45%
7DLH
23
0.42%
CYP51G1
20
0.36%
CYP80B1
19
0.35%
CCoAOMT
19
0.35%
CNMT
18
0.33%
CCR
18
0.33%
DFR
16
0.29%
CYP719
14
0.25%
GGPPS
14
0.25%
16OMT
13
0.24%
SQE
13
0.24%
CPR
12
0.22%
FPPS
12
0.22%
AACT
12
0.22%
SQS/FDFT1
11
0.2%
XMT_MXMT_DXMT
10
0.18%
LAMT
9
0.16%
ROT3/CYP90C1
9
0.16%
MPO
8
0.15%
ISY
8
0.15%
TYDC_DDC
8
0.15%
FLS
8
0.15%
CHS
8
0.15%
DXS
8
0.15%
CHI
7
0.13%
MVK
7
0.13%
MCT/IspD
6
0.11%
ADC
5
0.09%
SMO1/SMO2
5
0.09%
MVD
5
0.09%
CYP80F1
4
0.07%
TDC
4
0.07%
HPPR
4
0.07%
DET2
4
0.07%
HMGR
4
0.07%
HYD1
3
0.05%
HDR/IspH
3
0.05%
6OMT_4OMT_SOMT
2
0.04%
FK
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDS/IspG
2
0.04%
DXR
2
0.04%
DWF7
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 626 | 17 | UGT (220) | View species results |
| Alkaloid pathway | 507 | 26 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 454 | 13 | POD (164) | View species results |
| Flavonoid pathway | 254 | 16 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (50) | View species results |
| Steroid pathway | 106 | 12 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2212 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 353 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| alstonia_scholaris_tjs22865 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs22869 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs23995 | Alkaloid | COR | low | borderline |
| alstonia_scholaris_tjs26455 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs27060 | Alkaloid | COR | low | borderline |
| alstonia_scholaris_tjs27061 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs27062 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs30680 | Alkaloid | COR | low | borderline |
| alstonia_scholaris_tjs33318 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs33879 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs36810 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs36811 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs36812 | Alkaloid | COR | medium | pass |
| alstonia_scholaris_tjs02186 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs02370 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs04985 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs05743 | Alkaloid | CYP719 | low | borderline |
| alstonia_scholaris_tjs09758 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs11157 | Alkaloid | CYP719 | low | borderline |
| alstonia_scholaris_tjs12205 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs13027 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs13028 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs22555 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs24605 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs30072 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs31656 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs34977 | Alkaloid | CYP719 | medium | borderline |
| alstonia_scholaris_tjs02420 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs06512 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs07233 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs08660 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs08708 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs12051 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs12053 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs16646 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs16647 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs17477 | Alkaloid | CYP80B1 | low | borderline |
| alstonia_scholaris_tjs25509 | Alkaloid | CYP80B1 | medium | pass |
| alstonia_scholaris_tjs27517 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs27526 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs27529 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs28546 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs30304 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs30305 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs31977 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs34104.1 | Alkaloid | CYP80B1 | medium | borderline |
| alstonia_scholaris_tjs08658 | Alkaloid | CYP80F1 | medium | borderline |
| alstonia_scholaris_tjs08707 | Alkaloid | CYP80F1 | medium | borderline |
| alstonia_scholaris_tjs10483 | Alkaloid | CYP80F1 | medium | borderline |
| alstonia_scholaris_tjs13493 | Alkaloid | CYP80F1 | medium | borderline |