Alstonia scholaris (alstonia_scholaris)
Imported from atlas release summary for Alstonia scholaris.
2105
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2105
Candidate Genes
C4H
7.1%
C3'H/CYP98A
5.48%
UGT
4.77%
BAHD
4.66%
CYP76
4.31%
7DLGT
4.17%
UFGT
3.44%
POD
3.4%
Other Families
62.68%
More Families (94)
IFS
184
3.35%
4CL
165
3.0%
NMT
138
2.51%
T3O
137
2.49%
F3H
128
2.33%
F3'H/CYP75B
117
2.13%
CAD
99
1.8%
DWF4/CYP90B1
98
1.78%
STR
95
1.73%
BR6OX2/CYP85A2
95
1.73%
CYP71
94
1.71%
T16H
90
1.64%
CODM/T6ODM
88
1.6%
H6H
86
1.56%
G8O/G8H
84
1.53%
GS
76
1.38%
TRI/TRII
68
1.24%
FNS
67
1.22%
SMT1/SMT2/SMT3
60
1.09%
LAC
56
1.02%
HCT
56
1.02%
SGD
53
0.96%
F3'5'H/CYP75A
53
0.96%
F5H/CYP84A
53
0.96%
CYP90D1
53
0.96%
CSE
50
0.91%
TPS
50
0.91%
IO
49
0.89%
IFR
49
0.89%
CAS
44
0.8%
COMT
43
0.78%
GES
42
0.76%
RAS
41
0.75%
SLS
37
0.67%
PYKS
37
0.67%
BBE
33
0.6%
TAT
33
0.6%
NCS
32
0.58%
ANS/LDOX
32
0.58%
ANR
32
0.58%
PMT
27
0.49%
PAL
27
0.49%
8HGO
26
0.47%
COR
26
0.47%
CPD/CYP90A1
26
0.47%
BR6OX1/CYP85A1
25
0.45%
7DLH
23
0.42%
CYP51G1
20
0.36%
CYP80B1
19
0.35%
CCoAOMT
19
0.35%
CNMT
18
0.33%
CCR
18
0.33%
DFR
16
0.29%
CYP719
14
0.25%
GGPPS
14
0.25%
16OMT
13
0.24%
SQE
13
0.24%
CPR
12
0.22%
FPPS
12
0.22%
AACT
12
0.22%
SQS/FDFT1
11
0.2%
XMT_MXMT_DXMT
10
0.18%
LAMT
9
0.16%
ROT3/CYP90C1
9
0.16%
MPO
8
0.15%
ISY
8
0.15%
TYDC_DDC
8
0.15%
FLS
8
0.15%
CHS
8
0.15%
DXS
8
0.15%
CHI
7
0.13%
MVK
7
0.13%
MCT/IspD
6
0.11%
ADC
5
0.09%
SMO1/SMO2
5
0.09%
MVD
5
0.09%
CYP80F1
4
0.07%
TDC
4
0.07%
HPPR
4
0.07%
DET2
4
0.07%
HMGR
4
0.07%
HYD1
3
0.05%
HDR/IspH
3
0.05%
6OMT_4OMT_SOMT
2
0.04%
FK
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
HDS/IspG
2
0.04%
DXR
2
0.04%
DWF7
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 626 | 17 | UGT (220) | View species results |
| Alkaloid pathway | 507 | 26 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 454 | 13 | POD (164) | View species results |
| Flavonoid pathway | 254 | 16 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (50) | View species results |
| Steroid pathway | 106 | 12 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2212 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 353 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| alstonia_scholaris_tjs06518 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| alstonia_scholaris_tjs06636 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs06662 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| alstonia_scholaris_tjs06780 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs06784 | Terpenoid | BAHD | medium | pass | BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH |
| alstonia_scholaris_tjs06984 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| alstonia_scholaris_tjs07072 | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| alstonia_scholaris_tjs07563 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| alstonia_scholaris_tjs07617.1 | Terpenoid | BAHD | medium | pass | BAHD__00013__sp_B3DN87_ZDH12_ARATH |
| alstonia_scholaris_tjs07915 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| alstonia_scholaris_tjs07916 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| alstonia_scholaris_tjs07917 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| alstonia_scholaris_tjs07964 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs08003 | Terpenoid | BAHD | medium | pass | BAHD__00069__sp_Q9C5W0_DGAT3_ARATH |
| alstonia_scholaris_tjs08011 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| alstonia_scholaris_tjs08048 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| alstonia_scholaris_tjs08073 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| alstonia_scholaris_tjs08188 | Terpenoid | BAHD | medium | pass | BAHD__00033__sp_P0DXG0_AT_STRYX |
| alstonia_scholaris_tjs08197 | Terpenoid | BAHD | medium | pass | BAHD__00040__sp_Q41745_LPAT_MAIZE |
| alstonia_scholaris_tjs08423 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| alstonia_scholaris_tjs08674 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| alstonia_scholaris_tjs08904 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| alstonia_scholaris_tjs08990 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| alstonia_scholaris_tjs09160 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| alstonia_scholaris_tjs09330 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| alstonia_scholaris_tjs09392.1 | Terpenoid | BAHD | medium | pass | BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ |
| alstonia_scholaris_tjs09883 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs10479 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| alstonia_scholaris_tjs10698 | Terpenoid | BAHD | medium | pass | BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ |
| alstonia_scholaris_tjs10719 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| alstonia_scholaris_tjs10723 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| alstonia_scholaris_tjs10744 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs10755 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs10756 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs10757 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs10758 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| alstonia_scholaris_tjs11275 | Terpenoid | BAHD | low | borderline | BAHD__00001__sp_A0A068BGA5_AT1_ACTDE |
| alstonia_scholaris_tjs11665 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| alstonia_scholaris_tjs11744 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| alstonia_scholaris_tjs11776 | Terpenoid | BAHD | low | borderline | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| alstonia_scholaris_tjs12196 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| alstonia_scholaris_tjs12326 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| alstonia_scholaris_tjs12967.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| alstonia_scholaris_tjs13241 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| alstonia_scholaris_tjs13325 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| alstonia_scholaris_tjs13548 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| alstonia_scholaris_tjs13769 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| alstonia_scholaris_tjs13913 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| alstonia_scholaris_tjs13926 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| alstonia_scholaris_tjs14083 | Terpenoid | BAHD | medium | pass | BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY |