Amaranthus hypochondriacus (amaranthus_hypochondriacus)
Imported from atlas release summary for Amaranthus hypochondriacus.
1103
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1103
Candidate Genes
C4H
7.45%
BAHD
5.85%
POD
5.03%
C3'H/CYP98A
4.8%
4CL
3.91%
CYP76
3.8%
UGT
3.76%
7DLGT
3.58%
Other Families
61.82%
More Families (95)
UFGT
95
3.54%
NMT
90
3.35%
IFS
77
2.87%
T3O
66
2.46%
F3H
66
2.46%
F3'H/CYP75B
50
1.86%
CODM/T6ODM
49
1.82%
DWF4/CYP90B1
48
1.79%
G8O/G8H
46
1.71%
BR6OX2/CYP85A2
44
1.64%
STR
38
1.42%
CAD
38
1.42%
SMT1/SMT2/SMT3
36
1.34%
TPS
35
1.3%
TRI/TRII
34
1.27%
H6H
33
1.23%
HCT
33
1.23%
IFR
31
1.15%
CAS
31
1.15%
F3'5'H/CYP75A
30
1.12%
RAS
30
1.12%
PYKS
28
1.04%
GES
28
1.04%
CYP71
26
0.97%
LAC
24
0.89%
SLS
23
0.86%
BBE
22
0.82%
SGD
22
0.82%
CSE
22
0.82%
COMT
22
0.82%
T16H
21
0.78%
PMT
21
0.78%
7DLH
20
0.74%
FNS
20
0.74%
BR6OX1/CYP85A1
19
0.71%
GS
18
0.67%
IO
16
0.6%
F5H/CYP84A
15
0.56%
ANR
14
0.52%
16OMT
13
0.48%
ANS/LDOX
12
0.45%
CCR
12
0.45%
CYP90D1
12
0.45%
CPD/CYP90A1
11
0.41%
DFR
10
0.37%
PAL
9
0.34%
TAT
9
0.34%
CPR
9
0.34%
FPPS
9
0.34%
TYDC_DDC
7
0.26%
TDC
7
0.26%
8HGO
7
0.26%
XMT_MXMT_DXMT
7
0.26%
CCoAOMT
7
0.26%
HPPR
7
0.26%
HYD1
7
0.26%
AACT
7
0.26%
GGPPS
7
0.26%
NCS
6
0.22%
CYP80B1
6
0.22%
COR
6
0.22%
LAMT
6
0.22%
FLS
6
0.22%
ROT3/CYP90C1
6
0.22%
SQS/FDFT1
5
0.19%
CNMT
4
0.15%
MPO
4
0.15%
ISY
4
0.15%
CHS
4
0.15%
CHI
4
0.15%
DET2
4
0.15%
CYP51G1
4
0.15%
DWF7
4
0.15%
HMGR
3
0.11%
DXS
3
0.11%
MVD
3
0.11%
IDI
3
0.11%
MVK
3
0.11%
CPI1
2
0.07%
SMO1/SMO2
2
0.07%
SQE
2
0.07%
MDS/IspF
2
0.07%
HMGS
2
0.07%
ADC
1
0.04%
CYP80F1
1
0.04%
CYP719
1
0.04%
DWF1
1
0.04%
FK
1
0.04%
DWF5
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
PMK
1
0.04%
MCT/IspD
1
0.04%
CMK/IspE
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 330 | 19 | BAHD (118) | View species results |
| Phenylpropanoid pathway | 248 | 12 | POD (122) | View species results |
| Alkaloid pathway | 240 | 20 | NMT (47) | View species results |
| Flavonoid pathway | 148 | 13 | UFGT (88) | View species results |
| Rosmarinic acid pathway | 78 | 7 | 4CL (25) | View species results |
| Steroid pathway | 59 | 13 | CAS (22) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 973 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 220 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| AMhypScaffold_130069870.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| AMhypScaffold_130070650.1 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| AMhypScaffold_130077630.1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| AMhypScaffold_130077760.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| AMhypScaffold_130079060.1 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| AMhypScaffold_140085160.1 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| AMhypScaffold_140085180.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| AMhypScaffold_140085250.1 | Terpenoid | BAHD | medium | pass | BAHD__00019__sp_I1MSF2_DAT1B_SOYBN |
| AMhypScaffold_140085370.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| AMhypScaffold_140086390.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| AMhypScaffold_140088160.1 | Terpenoid | BAHD | medium | pass | BAHD__00054__sp_Q8GYW8_SCT_ARATH |
| AMhypScaffold_140088520.1 | Terpenoid | BAHD | medium | pass | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| AMhypScaffold_140088530.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| AMhypScaffold_140090130.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| AMhypScaffold_150094410.1 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| AMhypScaffold_160101260.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| AMhypScaffold_160103720.1 | Terpenoid | BAHD | medium | pass | BAHD__00071__sp_Q9CAY3_GPAT5_ARATH |
| AMhypScaffold_160104490.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| AMhypScaffold_160105120.1 | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| AMhypScaffold_160106660.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| AMhypScaffold_20111210.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| AMhypScaffold_20112780.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| AMhypScaffold_20115910.1 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| AMhypScaffold_20116970.1 | Terpenoid | BAHD | medium | pass | BAHD__00078__sp_Q9LHS7_GPAT7_ARATH |
| AMhypScaffold_20119220.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| AMhypScaffold_20122360.1 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| AMhypScaffold_20127000.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| AMhypScaffold_20128530.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| AMhypScaffold_20128970.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| AMhypScaffold_30132640.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| AMhypScaffold_30132830.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| AMhypScaffold_30134600.1 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| AMhypScaffold_30135100.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| AMhypScaffold_30135650.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| AMhypScaffold_30136830.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| AMhypScaffold_30138440.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| AMhypScaffold_30143170.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| AMhypScaffold_30148590.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| AMhypScaffold_30149480.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| AMhypScaffold_30149490.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| AMhypScaffold_30149500.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| AMhypScaffold_30149560.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| AMhypScaffold_30150270.1 | Terpenoid | BAHD | medium | pass | BAHD__00011__sp_A1A442_DGAT2_RICCO |
| AMhypScaffold_30150280.1 | Terpenoid | BAHD | medium | pass | BAHD__00067__sp_Q9ASU1_DGAT2_ARATH |
| AMhypScaffold_30150300.1 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| AMhypScaffold_30150320.1 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| AMhypScaffold_40151290.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| AMhypScaffold_40151300.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| AMhypScaffold_40151310.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| AMhypScaffold_40151390.1 | Terpenoid | BAHD | low | borderline | BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH |