Amaranthus hypochondriacus (amaranthus_hypochondriacus)
Imported from atlas release summary for Amaranthus hypochondriacus.
1363
Candidate Protein Records
1103
Pathway-Level Records
2685
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2685
Family-Level Calls
C4H
7.45%
BAHD
5.85%
POD
5.03%
C3'H/CYP98A
4.8%
4CL
3.91%
CYP76
3.8%
UGT
3.76%
7DLGT
3.58%
Other Families
61.82%
More Families (95)
UFGT
95
3.54%
NMT
90
3.35%
IFS
77
2.87%
T3O
66
2.46%
F3H
66
2.46%
F3'H/CYP75B
50
1.86%
CODM/T6ODM
49
1.82%
DWF4/CYP90B1
48
1.79%
G8O/G8H
46
1.71%
BR6OX2/CYP85A2
44
1.64%
STR
38
1.42%
CAD
38
1.42%
SMT1/SMT2/SMT3
36
1.34%
TPS
35
1.3%
TRI/TRII
34
1.27%
H6H
33
1.23%
HCT
33
1.23%
IFR
31
1.15%
CAS
31
1.15%
F3'5'H/CYP75A
30
1.12%
RAS
30
1.12%
PYKS
28
1.04%
GES
28
1.04%
CYP71
26
0.97%
LAC
24
0.89%
SLS
23
0.86%
BBE
22
0.82%
SGD
22
0.82%
CSE
22
0.82%
COMT
22
0.82%
T16H
21
0.78%
PMT
21
0.78%
7DLH
20
0.74%
FNS
20
0.74%
BR6OX1/CYP85A1
19
0.71%
GS
18
0.67%
IO
16
0.6%
F5H/CYP84A
15
0.56%
ANR
14
0.52%
16OMT
13
0.48%
ANS/LDOX
12
0.45%
CCR
12
0.45%
CYP90D1
12
0.45%
CPD/CYP90A1
11
0.41%
DFR
10
0.37%
PAL
9
0.34%
TAT
9
0.34%
CPR
9
0.34%
FPPS
9
0.34%
TYDC_DDC
7
0.26%
TDC
7
0.26%
8HGO
7
0.26%
XMT_MXMT_DXMT
7
0.26%
CCoAOMT
7
0.26%
HPPR
7
0.26%
HYD1
7
0.26%
AACT
7
0.26%
GGPPS
7
0.26%
NCS
6
0.22%
CYP80B1
6
0.22%
COR
6
0.22%
LAMT
6
0.22%
FLS
6
0.22%
ROT3/CYP90C1
6
0.22%
SQS/FDFT1
5
0.19%
CNMT
4
0.15%
MPO
4
0.15%
ISY
4
0.15%
CHS
4
0.15%
CHI
4
0.15%
DET2
4
0.15%
CYP51G1
4
0.15%
DWF7
4
0.15%
HMGR
3
0.11%
DXS
3
0.11%
MVD
3
0.11%
IDI
3
0.11%
MVK
3
0.11%
CPI1
2
0.07%
SMO1/SMO2
2
0.07%
SQE
2
0.07%
MDS/IspF
2
0.07%
HMGS
2
0.07%
ADC
1
0.04%
CYP80F1
1
0.04%
CYP719
1
0.04%
DWF1
1
0.04%
FK
1
0.04%
DWF5
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
PMK
1
0.04%
MCT/IspD
1
0.04%
CMK/IspE
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 330 | 19 | BAHD (118) | View species results |
| Phenylpropanoid pathway | 248 | 12 | POD (122) | View species results |
| Alkaloid pathway | 240 | 20 | NMT (47) | View species results |
| Flavonoid pathway | 148 | 13 | UFGT (88) | View species results |
| Rosmarinic acid pathway | 78 | 7 | 4CL (25) | View species results |
| Steroid pathway | 59 | 13 | CAS (22) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 973 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 220 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| AMhypScaffold_20112060.1 | Terpenoid | FPPS | medium | pass |
| AMhypScaffold_40161550.1 | Terpenoid | FPPS | medium | pass |
| AMhypScaffold_50172490.1 | Terpenoid | FPPS | medium | pass |
| AMhypScaffold_60183400.1 | Terpenoid | FPPS | medium | pass |
| AMhypScaffold_80218080.1 | Terpenoid | FPPS | medium | pass |
| AMhypScaffold_90234120.1 | Terpenoid | FPPS | medium | pass |
| AMhypScaffold_10025210.1 | Terpenoid | GGPPS | medium | borderline |
| AMhypScaffold_110042790.1 | Terpenoid | GGPPS | medium | borderline |
| AMhypScaffold_20110990.1 | Terpenoid | GGPPS | medium | borderline |
| AMhypScaffold_20113500.1 | Terpenoid | GGPPS | low | borderline |
| AMhypScaffold_20125520.1 | Terpenoid | GGPPS | medium | borderline |
| AMhypScaffold_30141830.1 | Terpenoid | GGPPS | medium | borderline |
| AMhypScaffold_40165210.1 | Terpenoid | GGPPS | medium | borderline |
| AMhypScaffold_10020540.1 | Terpenoid | HDR/IspH | high | pass |
| AMhypScaffold_10014610.1 | Terpenoid | HDS/IspG | high | pass |
| AMhypScaffold_10011540.1 | Terpenoid | HMGR | medium | pass |
| AMhypScaffold_10018130.1 | Terpenoid | HMGR | medium | pass |
| AMhypScaffold_30145380.1 | Terpenoid | HMGR | medium | pass |
| AMhypScaffold_120061000.1 | Terpenoid | HMGS | medium | pass |
| AMhypScaffold_20117040.1 | Terpenoid | HMGS | medium | pass |
| AMhypScaffold_40160050.1 | Terpenoid | IDI | medium | pass |
| AMhypScaffold_60185880.1 | Terpenoid | IDI | low | borderline |
| AMhypScaffold_60197050.1 | Terpenoid | IDI | medium | pass |
| AMhypScaffold_20127840.1 | Terpenoid | MCT/IspD | medium | pass |
| AMhypScaffold_120054050.1 | Terpenoid | MDS/IspF | high | pass |
| AMhypScaffold_70198360.1 | Terpenoid | MDS/IspF | high | pass |
| AMhypScaffold_140086060.1 | Terpenoid | MVD | low | borderline |
| AMhypScaffold_20117940.1 | Terpenoid | MVD | medium | pass |
| AMhypScaffold_40161080.1 | Terpenoid | MVD | low | borderline |
| AMhypScaffold_60190040.1 | Terpenoid | MVK | medium | pass |
| AMhypScaffold_70201600.1 | Terpenoid | MVK | low | borderline |
| AMhypScaffold_70208620.1 | Terpenoid | MVK | low | borderline |
| AMhypScaffold_120058540.1 | Terpenoid | PMK | medium | pass |
| AMhypScaffold_10018250.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_10018260.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_10022600.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_130068750.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_130068770.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_130070450.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_40166970.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_40166980.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_40166990.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_50168650.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_50168660.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_60185100.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_60185110.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_60185120.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_60185130.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_60185290.1 | Terpenoid | TPS | medium | pass |
| AMhypScaffold_60186500.1 | Terpenoid | TPS | medium | pass |