PlantSME Plant secondary metabolism enzyme database

Ammopiptanthus nanus (ammopiptanthus_nanus)

Imported from atlas release summary for Ammopiptanthus nanus.

1345
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.06% Alkaloid pathway 23.87% Phenylpropanoid pathway 21.41% Flavonoid pathway 13.9% Rosmarinic acid pathway 7.43% Steroid pathway 6.32%
Family Distribution
C3'H/CYP98A 6.01% C4H 5.92% BAHD 5.61% POD 4.31% CYP76 3.91% UFGT 3.81% UGT 3.81% 7DLGT 3.75%
Other Families 62.86%
More Families (95)
4CL 120 3.72% T3O 109 3.38% IFS 102 3.16% F3H 97 3.01% NMT 82 2.54% F3'H/CYP75B 74 2.29% DWF4/CYP90B1 73 2.26% STR 64 1.98% CODM/T6ODM 64 1.98% SMT1/SMT2/SMT3 55 1.7% H6H 46 1.43% CAD 41 1.27% TRI/TRII 40 1.24% SGD 40 1.24% BR6OX2/CYP85A2 39 1.21% PYKS 37 1.15% LAC 37 1.15% CYP90D1 37 1.15% CYP71 37 1.15% CAS 34 1.05% IFR 31 0.96% COMT 30 0.93% CSE 30 0.93% HCT 28 0.87% ANR 27 0.84% RAS 26 0.81% G8O/G8H 25 0.77% T16H 24 0.74% IO 24 0.74% FNS 24 0.74% GS 22 0.68% PMT 21 0.65% CCR 21 0.65% CYP51G1 20 0.62% COR 19 0.59% 16OMT 19 0.59% BR6OX1/CYP85A1 19 0.59% BBE 18 0.56% SLS 17 0.53% F3'5'H/CYP75A 16 0.5% PAL 15 0.46% TAT 15 0.46% CPD/CYP90A1 15 0.46% LAMT 14 0.43% GES 14 0.43% CHS 14 0.43% TPS 14 0.43% 8HGO 12 0.37% 7DLH 12 0.37% F5H/CYP84A 11 0.34% CPR 11 0.34% MPO 10 0.31% DFR 10 0.31% ROT3/CYP90C1 10 0.31% CNMT 9 0.28% ANS/LDOX 9 0.28% NCS 8 0.25% CHI 8 0.25% AACT 8 0.25% GGPPS 8 0.25% CCoAOMT 7 0.22% SQS/FDFT1 7 0.22% SQE 7 0.22% ISY 6 0.19% HPPR 6 0.19% DET2 6 0.19% DXS 6 0.19% CYP719 5 0.15% MVK 5 0.15% TDC 4 0.12% CYP80B1 4 0.12% SMO1/SMO2 4 0.12% HMGR 4 0.12% FPPS 4 0.12% XMT_MXMT_DXMT 3 0.09% HMGS 3 0.09% HDS/IspG 3 0.09% MVD 3 0.09% FLS 2 0.06% HYD1 2 0.06% DWF7 2 0.06% MCT/IspD 2 0.06% CMK/IspE 2 0.06% IDI 2 0.06% PMK 2 0.06% DXR 2 0.06% ADC 1 0.03% ODC 1 0.03% TYDC_DDC 1 0.03% DWF1 1 0.03% CPI1 1 0.03% FK 1 0.03% DWF5 1 0.03% MDS/IspF 1 0.03% HDR/IspH 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 364 19 BAHD (149) View species results
Alkaloid pathway 321 22 7DLGT (63) View species results
Phenylpropanoid pathway 288 11 POD (130) View species results
Flavonoid pathway 187 12 UFGT (114) View species results
Rosmarinic acid pathway 100 7 C4H (41) View species results
Steroid pathway 85 12 SMT1/SMT2/SMT3 (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1184 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 235 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
AnanContig006070290130.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig006290292180.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010050313290.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010130317510.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010180324730.1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010470335700.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010480336550.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
AnanContig010480337720.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010530342130.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010610348560.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
AnanContig010610348570.1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
AnanContig010670350260.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010740352990.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
AnanContig010930368400.1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR