Avena eriantha (avena_eriantha)
Imported from atlas release summary for Avena eriantha.
2394
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2394
Candidate Genes
C4H
7.15%
C3'H/CYP98A
6.72%
BAHD
5.97%
UGT
4.35%
7DLGT
4.05%
UFGT
4.02%
CYP76
4.0%
T3O
3.93%
Other Families
59.82%
More Families (97)
POD
233
3.88%
IFS
202
3.37%
BR6OX2/CYP85A2
161
2.68%
F3'H/CYP75B
159
2.65%
DWF4/CYP90B1
147
2.45%
4CL
138
2.3%
CYP71
107
1.78%
F3H
103
1.72%
NMT
97
1.62%
SMT1/SMT2/SMT3
93
1.55%
PMT
85
1.42%
STR
77
1.28%
CAD
75
1.25%
TPS
73
1.22%
PYKS
70
1.17%
GES
69
1.15%
CSE
68
1.13%
CODM/T6ODM
66
1.1%
CAS
66
1.1%
COMT
64
1.07%
HCT
64
1.07%
SLS
60
1.0%
RAS
60
1.0%
G8O/G8H
59
0.98%
16OMT
58
0.97%
FNS
57
0.95%
SGD
56
0.93%
H6H
50
0.83%
T16H
49
0.82%
PAL
45
0.75%
TRI/TRII
44
0.73%
CYP90D1
44
0.73%
F3'5'H/CYP75A
42
0.7%
CYP51G1
40
0.67%
LAC
39
0.65%
CHS
34
0.57%
ANR
34
0.57%
CCR
32
0.53%
GS
31
0.52%
NCS
30
0.5%
IFR
30
0.5%
F5H/CYP84A
26
0.43%
BR6OX1/CYP85A1
25
0.42%
IO
23
0.38%
LAMT
23
0.38%
BBE
23
0.38%
CYP80B1
20
0.33%
DFR
20
0.33%
ANS/LDOX
20
0.33%
CPD/CYP90A1
19
0.32%
COR
16
0.27%
SMO1/SMO2
16
0.27%
FPPS
16
0.27%
CYP719
15
0.25%
TYDC_DDC
13
0.22%
TAT
13
0.22%
7DLH
12
0.2%
8HGO
12
0.2%
CNMT
11
0.18%
CPR
9
0.15%
ROT3/CYP90C1
9
0.15%
AACT
8
0.13%
MPO
7
0.12%
XMT_MXMT_DXMT
7
0.12%
CCoAOMT
7
0.12%
GGPPS
7
0.12%
HMGR
7
0.12%
ODC
6
0.1%
TDC
6
0.1%
SQS/FDFT1
6
0.1%
6OMT_4OMT_SOMT
5
0.08%
ADC
5
0.08%
FLS
5
0.08%
DET2
5
0.08%
DWF1
5
0.08%
HMGS
5
0.08%
HPPR
4
0.07%
MCT/IspD
4
0.07%
MVD
4
0.07%
MVK
4
0.07%
ISY
3
0.05%
CHI
3
0.05%
HYD1
3
0.05%
IDI
3
0.05%
CMK/IspE
3
0.05%
CYP80F1
2
0.03%
SQE
2
0.03%
DXS
2
0.03%
HDS/IspG
2
0.03%
DWF5
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
DXR
1
0.02%
PMK
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 697 | 19 | BAHD (267) | View species results |
| Alkaloid pathway | 552 | 24 | 7DLGT (109) | View species results |
| Phenylpropanoid pathway | 480 | 11 | POD (217) | View species results |
| Flavonoid pathway | 337 | 11 | UFGT (233) | View species results |
| Rosmarinic acid pathway | 201 | 7 | C4H (106) | View species results |
| Steroid pathway | 127 | 14 | SMT1/SMT2/SMT3 (60) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2529 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 482 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| AVeriSctCcfP_4_40370210.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| AVeriSctCcfP_4_40372630.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_4_40379080.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_4_40393570.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_4_40393580.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_670_13520398790.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_670_13520399590.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| AVeriSctCcfP_670_13520406930.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_670_13520413660.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_670_13520413670.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_670_13520419390.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| AVeriSctCcfP_670_13520421560.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| AVeriSctCcfP_670_13520447250.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| AVeriSctCcfP_670_13520450320.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| AVeriSctCcfP_670_13520452450.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| AVeriSctCcfP_670_13520454170.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |