PlantSME Plant secondary metabolism enzyme database

Avena eriantha (avena_eriantha)

Imported from atlas release summary for Avena eriantha.

2394
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.11% Alkaloid pathway 23.06% Phenylpropanoid pathway 20.05% Flavonoid pathway 14.08% Rosmarinic acid pathway 8.4% Steroid pathway 5.3%
Family Distribution
C4H 7.15% C3'H/CYP98A 6.72% BAHD 5.97% UGT 4.35% 7DLGT 4.05% UFGT 4.02% CYP76 4.0% T3O 3.93%
Other Families 59.82%
More Families (97)
POD 233 3.88% IFS 202 3.37% BR6OX2/CYP85A2 161 2.68% F3'H/CYP75B 159 2.65% DWF4/CYP90B1 147 2.45% 4CL 138 2.3% CYP71 107 1.78% F3H 103 1.72% NMT 97 1.62% SMT1/SMT2/SMT3 93 1.55% PMT 85 1.42% STR 77 1.28% CAD 75 1.25% TPS 73 1.22% PYKS 70 1.17% GES 69 1.15% CSE 68 1.13% CODM/T6ODM 66 1.1% CAS 66 1.1% COMT 64 1.07% HCT 64 1.07% SLS 60 1.0% RAS 60 1.0% G8O/G8H 59 0.98% 16OMT 58 0.97% FNS 57 0.95% SGD 56 0.93% H6H 50 0.83% T16H 49 0.82% PAL 45 0.75% TRI/TRII 44 0.73% CYP90D1 44 0.73% F3'5'H/CYP75A 42 0.7% CYP51G1 40 0.67% LAC 39 0.65% CHS 34 0.57% ANR 34 0.57% CCR 32 0.53% GS 31 0.52% NCS 30 0.5% IFR 30 0.5% F5H/CYP84A 26 0.43% BR6OX1/CYP85A1 25 0.42% IO 23 0.38% LAMT 23 0.38% BBE 23 0.38% CYP80B1 20 0.33% DFR 20 0.33% ANS/LDOX 20 0.33% CPD/CYP90A1 19 0.32% COR 16 0.27% SMO1/SMO2 16 0.27% FPPS 16 0.27% CYP719 15 0.25% TYDC_DDC 13 0.22% TAT 13 0.22% 7DLH 12 0.2% 8HGO 12 0.2% CNMT 11 0.18% CPR 9 0.15% ROT3/CYP90C1 9 0.15% AACT 8 0.13% MPO 7 0.12% XMT_MXMT_DXMT 7 0.12% CCoAOMT 7 0.12% GGPPS 7 0.12% HMGR 7 0.12% ODC 6 0.1% TDC 6 0.1% SQS/FDFT1 6 0.1% 6OMT_4OMT_SOMT 5 0.08% ADC 5 0.08% FLS 5 0.08% DET2 5 0.08% DWF1 5 0.08% HMGS 5 0.08% HPPR 4 0.07% MCT/IspD 4 0.07% MVD 4 0.07% MVK 4 0.07% ISY 3 0.05% CHI 3 0.05% HYD1 3 0.05% IDI 3 0.05% CMK/IspE 3 0.05% CYP80F1 2 0.03% SQE 2 0.03% DXS 2 0.03% HDS/IspG 2 0.03% DWF5 1 0.02% DWF7 1 0.02% CPI1 1 0.02% FK 1 0.02% DXR 1 0.02% PMK 1 0.02% HDR/IspH 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 697 19 BAHD (267) View species results
Alkaloid pathway 552 24 7DLGT (109) View species results
Phenylpropanoid pathway 480 11 POD (217) View species results
Flavonoid pathway 337 11 UFGT (233) View species results
Rosmarinic acid pathway 201 7 C4H (106) View species results
Steroid pathway 127 14 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2529 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 482 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status Best Target
AVeriSctCcfP_670_13520424370.1 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520428610.1 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520428620.1 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
AVeriSctCcfP_670_13520428650.1 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520428920.1 Phenylpropanoid COMT low borderline COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520428930.1 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520428940.1 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
AVeriSctCcfP_670_13520428950.1 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520428980.1 Phenylpropanoid COMT medium pass COMT__00002__sp_Q06509_COMT1_MAIZE
AVeriSctCcfP_670_13520428990.1 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
AVeriSctCcfP_670_13520429000.1 Phenylpropanoid COMT low borderline COMT__00007__sp_Q9FK25_OMT1_ARATH
AVeriSctCcfP_670_13520449970.1 Phenylpropanoid COMT medium pass COMT__00003__sp_Q38J50_FOMT2_WHEAT
AVeriSctCcfP_670_13520466180.1 Phenylpropanoid COMT medium pass COMT__00003__sp_Q38J50_FOMT2_WHEAT
AVeriSctCcfP_754_14970471490.1 Phenylpropanoid COMT low borderline COMT__00006__sp_Q84N28_FOMT1_WHEAT