PlantSME Plant secondary metabolism enzyme database

Bothriochloa decipiens (bothriochloa_decipiens)

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Imported from atlas release summary for Bothriochloa decipiens.

3677
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.76% Phenylpropanoid pathway 22.22% Alkaloid pathway 22.19% Flavonoid pathway 14.03% Rosmarinic acid pathway 9.38% Steroid pathway 5.41%
Family Distribution
C4H 6.41% C3'H/CYP98A 6.19% BAHD 4.85% POD 4.67% CYP76 4.03% UGT 3.9% T3O 3.62% 4CL 3.58%
Other Families 62.76%
More Families (98)
7DLGT 334 3.56% IFS 319 3.4% UFGT 313 3.33% F3'H/CYP75B 252 2.68% DWF4/CYP90B1 231 2.46% F3H 214 2.28% BR6OX2/CYP85A2 210 2.24% CYP71 161 1.71% NMT 148 1.58% STR 142 1.51% SMT1/SMT2/SMT3 127 1.35% CAD 126 1.34% CODM/T6ODM 125 1.33% TRI/TRII 121 1.29% CAS 118 1.26% TPS 115 1.22% G8O/G8H 105 1.12% HCT 103 1.1% GES 102 1.09% H6H 101 1.08% CCR 100 1.06% ANR 92 0.98% COMT 92 0.98% PYKS 91 0.97% SLS 91 0.97% LAC 91 0.97% RAS 86 0.92% F5H/CYP84A 85 0.91% FNS 81 0.86% T16H 78 0.83% PMT 77 0.82% SGD 73 0.78% 16OMT 72 0.77% IFR 70 0.75% CYP51G1 70 0.75% CYP90D1 68 0.72% F3'5'H/CYP75A 65 0.69% CSE 62 0.66% NCS 59 0.63% CHS 59 0.63% GS 56 0.6% IO 53 0.56% BR6OX1/CYP85A1 44 0.47% COR 42 0.45% DFR 42 0.45% PAL 42 0.45% 8HGO 31 0.33% CNMT 30 0.32% ANS/LDOX 30 0.32% CPD/CYP90A1 30 0.32% BBE 24 0.26% CYP719 22 0.23% 7DLH 22 0.23% TAT 21 0.22% XMT_MXMT_DXMT 19 0.2% FPPS 19 0.2% LAMT 18 0.19% CYP80B1 17 0.18% MPO 17 0.18% CPR 17 0.18% 6OMT_4OMT_SOMT 16 0.17% HPPR 16 0.17% ROT3/CYP90C1 16 0.17% SMO1/SMO2 16 0.17% TYDC_DDC 15 0.16% CCoAOMT 15 0.16% HMGR 12 0.13% GGPPS 12 0.13% SQS/FDFT1 10 0.11% HYD1 10 0.11% AACT 10 0.11% CHI 9 0.1% MVK 9 0.1% MVD 9 0.1% TDC 8 0.09% DXS 8 0.09% DWF1 7 0.07% DET2 7 0.07% HMGS 6 0.06% SQE 5 0.05% ODC 4 0.04% CYP80F1 4 0.04% ISY 4 0.04% FLS 4 0.04% CPI1 4 0.04% PMK 4 0.04% IDI 4 0.04% MCT/IspD 4 0.04% ADC 3 0.03% HDS/IspG 3 0.03% FK 2 0.02% DWF7 2 0.02% DWF5 2 0.02% HDR/IspH 2 0.02% CMK/IspE 2 0.02% DXR 2 0.02% MDS/IspF 2 0.02% GPPS 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 984 19 BAHD (329) View species results
Phenylpropanoid pathway 817 12 POD (399) View species results
Alkaloid pathway 816 25 7DLGT (169) View species results
Flavonoid pathway 516 14 UFGT (290) View species results
Rosmarinic acid pathway 345 7 C4H (172) View species results
Steroid pathway 199 11 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3844 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 644 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
bothriochloa_decipiens_Bdec51031-RA Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
bothriochloa_decipiens_Bdec51032-RA Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
bothriochloa_decipiens_Bdec51074-RA Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
bothriochloa_decipiens_Bdec52060-RA Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
bothriochloa_decipiens_Bdec52063-RA Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
bothriochloa_decipiens_Bdec52710-RA Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
bothriochloa_decipiens_Bdec54725-RA Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
bothriochloa_decipiens_Bdec54728-RA Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
bothriochloa_decipiens_Bdec54765-RA Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
bothriochloa_decipiens_Bdec57691-RA Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
bothriochloa_decipiens_Bdec57694-RA Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
bothriochloa_decipiens_Bdec58491-RA Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
bothriochloa_decipiens_Bdec58493-RA Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
bothriochloa_decipiens_Bdec60625-RA Terpenoid TPS medium pass TPS__00074__sp_C7E5V9_FARS_ZEADI
bothriochloa_decipiens_Bdec60644-RA Terpenoid TPS medium pass TPS__00058__sp_B2C4D0_TS23B_MAIZE