PlantSME Plant secondary metabolism enzyme database

Cerasus yedoensis (cerasus_yedoensis)

Imported from atlas release summary for Cerasus yedoensis.

4086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.27% Alkaloid pathway 24.38% Phenylpropanoid pathway 18.36% Flavonoid pathway 12.46% Rosmarinic acid pathway 9.06% Steroid pathway 5.48%
Family Distribution
BAHD 6.02% C4H 6.01% C3'H/CYP98A 5.08% UGT 4.87% 7DLGT 3.97% UFGT 3.84% CYP76 3.59% IFS 3.32%
Other Families 63.29%
More Families (97)
4CL 288 3.03% F3H 278 2.93% POD 256 2.69% T3O 255 2.68% SGD 207 2.18% DWF4/CYP90B1 205 2.16% CAD 180 1.89% F3'H/CYP75B 175 1.84% NMT 172 1.81% H6H 170 1.79% STR 164 1.73% TPS 155 1.63% CODM/T6ODM 150 1.58% GES 142 1.49% LAC 139 1.46% CAS 137 1.44% BR6OX2/CYP85A2 120 1.26% CYP71 120 1.26% HCT 114 1.2% TAT 111 1.17% CYP90D1 107 1.13% TRI/TRII 98 1.03% IFR 97 1.02% CSE 96 1.01% SMT1/SMT2/SMT3 94 0.99% 7DLH 91 0.96% BBE 86 0.91% T16H 84 0.88% COMT 84 0.88% GS 78 0.82% IO 77 0.81% G8O/G8H 77 0.81% PMT 76 0.8% RAS 75 0.79% FNS 69 0.73% PYKS 62 0.65% 16OMT 59 0.62% BR6OX1/CYP85A1 54 0.57% NCS 53 0.56% CCR 53 0.56% ANR 52 0.55% 8HGO 51 0.54% F3'5'H/CYP75A 51 0.54% F5H/CYP84A 51 0.54% LAMT 45 0.47% COR 44 0.46% SLS 39 0.41% PAL 39 0.41% CPD/CYP90A1 35 0.37% DFR 32 0.34% ROT3/CYP90C1 32 0.34% ANS/LDOX 28 0.29% CHS 25 0.26% CYP51G1 24 0.25% AACT 24 0.25% FPPS 19 0.2% CNMT 17 0.18% GGPPS 16 0.17% SQS/FDFT1 15 0.16% MVD 15 0.16% MPO 14 0.15% ISY 13 0.14% CYP719 13 0.14% HMGR 13 0.14% CYP80B1 12 0.13% HDR/IspH 12 0.13% FLS 11 0.12% CCoAOMT 11 0.12% CPR 11 0.12% TDC 10 0.11% TYDC_DDC 10 0.11% SQE 10 0.11% XMT_MXMT_DXMT 9 0.09% DET2 9 0.09% DXS 8 0.08% ODC 7 0.07% CHI 7 0.07% HPPR 7 0.07% MVK 7 0.07% 6OMT_4OMT_SOMT 6 0.06% DWF1 5 0.05% SMO1/SMO2 5 0.05% PMK 5 0.05% DWF7 4 0.04% FK 4 0.04% HMGS 4 0.04% MCT/IspD 4 0.04% CPI1 3 0.03% CMK/IspE 3 0.03% HDS/IspG 3 0.03% ADC 2 0.02% DWF5 2 0.02% MDS/IspF 2 0.02% DXR 2 0.02% CYP80F1 1 0.01% HYD1 1 0.01% IDI 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1237 21 BAHD (464) View species results
Alkaloid pathway 996 24 7DLGT (192) View species results
Phenylpropanoid pathway 750 12 POD (221) View species results
Flavonoid pathway 509 13 UFGT (307) View species results
Rosmarinic acid pathway 370 7 C4H (125) View species results
Steroid pathway 224 14 CAS (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3333 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 761 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Cyed0A0G0000960 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Cyed0A0G0012210 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Cyed0A0G0018910 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Cyed0A0G0019310 Alkaloid NMT medium pass NMT__00059__sp_Q9M571_PEAMT_SPIOL
Cyed0A0G0019340 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Cyed0A0G0031130 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Cyed0A0G0075950 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Cyed0A0G0076240 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Cyed0A0G0079780 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
Cyed0A0G0080440 Alkaloid NMT medium borderline NMT__00064__sp_Q9SEH5_PMT3_TOBAC
Cyed0A0G0083710 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Cyed0A0G0088420 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Cyed0A0G0089280 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Cyed0A0G0096700 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Cyed0A0G0100530 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
Cyed0A0G0100570 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Cyed0A0G0101380 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Cyed0A0G0106800 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Cyed0A0G0106810 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Cyed0A0G0106820 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Cyed0A0G0120500 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Cyed0A0G0128810 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Cyed0A0G0132440 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Cyed0A0G0144450 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Cyed0A1G0002680 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Cyed0A1G0009230 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Cyed0A1G0009360 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Cyed0A1G0016560 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
Cyed0A1G0023960 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Cyed0A1G0033540 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Cyed0A1G0035670 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Cyed0A1G0035820 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Cyed0A1G0036060 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Cyed0A1G0036640 Alkaloid NMT low borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Cyed0A1G0037650 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Cyed0A2G0004920 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
Cyed0A2G0004950 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Cyed0A2G0006730 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Cyed0A2G0007510 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Cyed0A2G0009120 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Cyed0A2G0009130 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Cyed0A2G0009150 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Cyed0A2G0025570 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Cyed0A2G0028580 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Cyed0A2G0029920 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
Cyed0A2G0030040 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
Cyed0A2G0036550 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Cyed0A2G0040680 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Cyed0A2G0040990 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Cyed0A3G0011010 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH