PlantSME Plant secondary metabolism enzyme database

Cerasus yedoensis (cerasus_yedoensis)

Imported from atlas release summary for Cerasus yedoensis.

4086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.27% Alkaloid pathway 24.38% Phenylpropanoid pathway 18.36% Flavonoid pathway 12.46% Rosmarinic acid pathway 9.06% Steroid pathway 5.48%
Family Distribution
BAHD 6.02% C4H 6.01% C3'H/CYP98A 5.08% UGT 4.87% 7DLGT 3.97% UFGT 3.84% CYP76 3.59% IFS 3.32%
Other Families 63.29%
More Families (97)
4CL 288 3.03% F3H 278 2.93% POD 256 2.69% T3O 255 2.68% SGD 207 2.18% DWF4/CYP90B1 205 2.16% CAD 180 1.89% F3'H/CYP75B 175 1.84% NMT 172 1.81% H6H 170 1.79% STR 164 1.73% TPS 155 1.63% CODM/T6ODM 150 1.58% GES 142 1.49% LAC 139 1.46% CAS 137 1.44% BR6OX2/CYP85A2 120 1.26% CYP71 120 1.26% HCT 114 1.2% TAT 111 1.17% CYP90D1 107 1.13% TRI/TRII 98 1.03% IFR 97 1.02% CSE 96 1.01% SMT1/SMT2/SMT3 94 0.99% 7DLH 91 0.96% BBE 86 0.91% T16H 84 0.88% COMT 84 0.88% GS 78 0.82% IO 77 0.81% G8O/G8H 77 0.81% PMT 76 0.8% RAS 75 0.79% FNS 69 0.73% PYKS 62 0.65% 16OMT 59 0.62% BR6OX1/CYP85A1 54 0.57% NCS 53 0.56% CCR 53 0.56% ANR 52 0.55% 8HGO 51 0.54% F3'5'H/CYP75A 51 0.54% F5H/CYP84A 51 0.54% LAMT 45 0.47% COR 44 0.46% SLS 39 0.41% PAL 39 0.41% CPD/CYP90A1 35 0.37% DFR 32 0.34% ROT3/CYP90C1 32 0.34% ANS/LDOX 28 0.29% CHS 25 0.26% CYP51G1 24 0.25% AACT 24 0.25% FPPS 19 0.2% CNMT 17 0.18% GGPPS 16 0.17% SQS/FDFT1 15 0.16% MVD 15 0.16% MPO 14 0.15% ISY 13 0.14% CYP719 13 0.14% HMGR 13 0.14% CYP80B1 12 0.13% HDR/IspH 12 0.13% FLS 11 0.12% CCoAOMT 11 0.12% CPR 11 0.12% TDC 10 0.11% TYDC_DDC 10 0.11% SQE 10 0.11% XMT_MXMT_DXMT 9 0.09% DET2 9 0.09% DXS 8 0.08% ODC 7 0.07% CHI 7 0.07% HPPR 7 0.07% MVK 7 0.07% 6OMT_4OMT_SOMT 6 0.06% DWF1 5 0.05% SMO1/SMO2 5 0.05% PMK 5 0.05% DWF7 4 0.04% FK 4 0.04% HMGS 4 0.04% MCT/IspD 4 0.04% CPI1 3 0.03% CMK/IspE 3 0.03% HDS/IspG 3 0.03% ADC 2 0.02% DWF5 2 0.02% MDS/IspF 2 0.02% DXR 2 0.02% CYP80F1 1 0.01% HYD1 1 0.01% IDI 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1237 21 BAHD (464) View species results
Alkaloid pathway 996 24 7DLGT (192) View species results
Phenylpropanoid pathway 750 12 POD (221) View species results
Flavonoid pathway 509 13 UFGT (307) View species results
Rosmarinic acid pathway 370 7 C4H (125) View species results
Steroid pathway 224 14 CAS (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3333 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 761 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Cyed0E0G0035030 Alkaloid PMT medium pass
Cyed0E0G0085830 Alkaloid PMT medium borderline
Cyed0E0G0123690 Alkaloid PMT low borderline
Cyed0E0G0123940 Alkaloid PMT low borderline
Cyed0E0G0123950 Alkaloid PMT low borderline
Cyed0E0G0131190 Alkaloid PMT low borderline
Cyed0E0G0139590 Alkaloid PMT low borderline
Cyed0E0G0146390 Alkaloid PMT medium pass
Cyed0E0G0152990 Alkaloid PMT medium pass
Cyed0E1G0017880 Alkaloid PMT medium borderline
Cyed0E1G0032920 Alkaloid PMT medium pass
Cyed0E2G0028670 Alkaloid PMT low borderline
Cyed0E2G0034280 Alkaloid PMT medium borderline
Cyed0E3G0010650 Alkaloid PMT low borderline
Cyed0E3G0011390 Alkaloid PMT low borderline
Cyed0E3G0011480 Alkaloid PMT low borderline
Cyed0E3G0011540 Alkaloid PMT low borderline
Cyed0E3G0020680 Alkaloid PMT low borderline
Cyed0E3G0035880 Alkaloid PMT low borderline
Cyed0E5G0021100 Alkaloid PMT low borderline
Cyed0E5G0023570 Alkaloid PMT medium borderline
Cyed0E7G0014950 Alkaloid PMT medium pass
Cyed0E7G0015030 Alkaloid PMT low borderline
Cyed0E8G0001550 Alkaloid PMT medium pass
Cyed0E8G0004650 Alkaloid PMT medium pass
Cyed0E8G0014190 Alkaloid PMT low borderline