PlantSME Plant secondary metabolism enzyme database

Cerasus yedoensis (cerasus_yedoensis)

Imported from atlas release summary for Cerasus yedoensis.

4086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.27% Alkaloid pathway 24.38% Phenylpropanoid pathway 18.36% Flavonoid pathway 12.46% Rosmarinic acid pathway 9.06% Steroid pathway 5.48%
Family Distribution
BAHD 6.02% C4H 6.01% C3'H/CYP98A 5.08% UGT 4.87% 7DLGT 3.97% UFGT 3.84% CYP76 3.59% IFS 3.32%
Other Families 63.29%
More Families (97)
4CL 288 3.03% F3H 278 2.93% POD 256 2.69% T3O 255 2.68% SGD 207 2.18% DWF4/CYP90B1 205 2.16% CAD 180 1.89% F3'H/CYP75B 175 1.84% NMT 172 1.81% H6H 170 1.79% STR 164 1.73% TPS 155 1.63% CODM/T6ODM 150 1.58% GES 142 1.49% LAC 139 1.46% CAS 137 1.44% BR6OX2/CYP85A2 120 1.26% CYP71 120 1.26% HCT 114 1.2% TAT 111 1.17% CYP90D1 107 1.13% TRI/TRII 98 1.03% IFR 97 1.02% CSE 96 1.01% SMT1/SMT2/SMT3 94 0.99% 7DLH 91 0.96% BBE 86 0.91% T16H 84 0.88% COMT 84 0.88% GS 78 0.82% IO 77 0.81% G8O/G8H 77 0.81% PMT 76 0.8% RAS 75 0.79% FNS 69 0.73% PYKS 62 0.65% 16OMT 59 0.62% BR6OX1/CYP85A1 54 0.57% NCS 53 0.56% CCR 53 0.56% ANR 52 0.55% 8HGO 51 0.54% F3'5'H/CYP75A 51 0.54% F5H/CYP84A 51 0.54% LAMT 45 0.47% COR 44 0.46% SLS 39 0.41% PAL 39 0.41% CPD/CYP90A1 35 0.37% DFR 32 0.34% ROT3/CYP90C1 32 0.34% ANS/LDOX 28 0.29% CHS 25 0.26% CYP51G1 24 0.25% AACT 24 0.25% FPPS 19 0.2% CNMT 17 0.18% GGPPS 16 0.17% SQS/FDFT1 15 0.16% MVD 15 0.16% MPO 14 0.15% ISY 13 0.14% CYP719 13 0.14% HMGR 13 0.14% CYP80B1 12 0.13% HDR/IspH 12 0.13% FLS 11 0.12% CCoAOMT 11 0.12% CPR 11 0.12% TDC 10 0.11% TYDC_DDC 10 0.11% SQE 10 0.11% XMT_MXMT_DXMT 9 0.09% DET2 9 0.09% DXS 8 0.08% ODC 7 0.07% CHI 7 0.07% HPPR 7 0.07% MVK 7 0.07% 6OMT_4OMT_SOMT 6 0.06% DWF1 5 0.05% SMO1/SMO2 5 0.05% PMK 5 0.05% DWF7 4 0.04% FK 4 0.04% HMGS 4 0.04% MCT/IspD 4 0.04% CPI1 3 0.03% CMK/IspE 3 0.03% HDS/IspG 3 0.03% ADC 2 0.02% DWF5 2 0.02% MDS/IspF 2 0.02% DXR 2 0.02% CYP80F1 1 0.01% HYD1 1 0.01% IDI 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1237 21 BAHD (464) View species results
Alkaloid pathway 996 24 7DLGT (192) View species results
Phenylpropanoid pathway 750 12 POD (221) View species results
Flavonoid pathway 509 13 UFGT (307) View species results
Rosmarinic acid pathway 370 7 C4H (125) View species results
Steroid pathway 224 14 CAS (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3333 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 761 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
Cyed0E0G0156580 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0156630 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0168420 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0173350 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0173400 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0173410 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0183050 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E0G0183070 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0004110 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0004120 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0008590 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Cyed0E1G0023390 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Cyed0E1G0023590 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0025310 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0028260 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0038710 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E1G0038730 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E2G0009570 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E2G0009610 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E2G0024440 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E2G0025950 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0006610 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0006630 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0006700 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0006720 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0008530 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0008540 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0008550 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0008560 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0014030 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E3G0032460 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E4G0016830 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E4G0025550 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E4G0025680 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E4G0028530 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E4G0033770 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E4G0034110 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Cyed0E5G0026600 Alkaloid STR low borderline STR__00002__sp_P68175_STSY_RAUSE
Cyed0E5G0026650 Alkaloid STR low borderline STR__00002__sp_P68175_STSY_RAUSE
Cyed0E6G0002540 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0005650 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0010920 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0011080 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0012730 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0015720 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Cyed0E6G0023340 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0025060 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0025070 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0025090 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Cyed0E6G0028660 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR