PlantSME Plant secondary metabolism enzyme database

Cerasus yedoensis (cerasus_yedoensis)

Imported from atlas release summary for Cerasus yedoensis.

4086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.27% Alkaloid pathway 24.38% Phenylpropanoid pathway 18.36% Flavonoid pathway 12.46% Rosmarinic acid pathway 9.06% Steroid pathway 5.48%
Family Distribution
BAHD 6.02% C4H 6.01% C3'H/CYP98A 5.08% UGT 4.87% 7DLGT 3.97% UFGT 3.84% CYP76 3.59% IFS 3.32%
Other Families 63.29%
More Families (97)
4CL 288 3.03% F3H 278 2.93% POD 256 2.69% T3O 255 2.68% SGD 207 2.18% DWF4/CYP90B1 205 2.16% CAD 180 1.89% F3'H/CYP75B 175 1.84% NMT 172 1.81% H6H 170 1.79% STR 164 1.73% TPS 155 1.63% CODM/T6ODM 150 1.58% GES 142 1.49% LAC 139 1.46% CAS 137 1.44% BR6OX2/CYP85A2 120 1.26% CYP71 120 1.26% HCT 114 1.2% TAT 111 1.17% CYP90D1 107 1.13% TRI/TRII 98 1.03% IFR 97 1.02% CSE 96 1.01% SMT1/SMT2/SMT3 94 0.99% 7DLH 91 0.96% BBE 86 0.91% T16H 84 0.88% COMT 84 0.88% GS 78 0.82% IO 77 0.81% G8O/G8H 77 0.81% PMT 76 0.8% RAS 75 0.79% FNS 69 0.73% PYKS 62 0.65% 16OMT 59 0.62% BR6OX1/CYP85A1 54 0.57% NCS 53 0.56% CCR 53 0.56% ANR 52 0.55% 8HGO 51 0.54% F3'5'H/CYP75A 51 0.54% F5H/CYP84A 51 0.54% LAMT 45 0.47% COR 44 0.46% SLS 39 0.41% PAL 39 0.41% CPD/CYP90A1 35 0.37% DFR 32 0.34% ROT3/CYP90C1 32 0.34% ANS/LDOX 28 0.29% CHS 25 0.26% CYP51G1 24 0.25% AACT 24 0.25% FPPS 19 0.2% CNMT 17 0.18% GGPPS 16 0.17% SQS/FDFT1 15 0.16% MVD 15 0.16% MPO 14 0.15% ISY 13 0.14% CYP719 13 0.14% HMGR 13 0.14% CYP80B1 12 0.13% HDR/IspH 12 0.13% FLS 11 0.12% CCoAOMT 11 0.12% CPR 11 0.12% TDC 10 0.11% TYDC_DDC 10 0.11% SQE 10 0.11% XMT_MXMT_DXMT 9 0.09% DET2 9 0.09% DXS 8 0.08% ODC 7 0.07% CHI 7 0.07% HPPR 7 0.07% MVK 7 0.07% 6OMT_4OMT_SOMT 6 0.06% DWF1 5 0.05% SMO1/SMO2 5 0.05% PMK 5 0.05% DWF7 4 0.04% FK 4 0.04% HMGS 4 0.04% MCT/IspD 4 0.04% CPI1 3 0.03% CMK/IspE 3 0.03% HDS/IspG 3 0.03% ADC 2 0.02% DWF5 2 0.02% MDS/IspF 2 0.02% DXR 2 0.02% CYP80F1 1 0.01% HYD1 1 0.01% IDI 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1237 21 BAHD (464) View species results
Alkaloid pathway 996 24 7DLGT (192) View species results
Phenylpropanoid pathway 750 12 POD (221) View species results
Flavonoid pathway 509 13 UFGT (307) View species results
Rosmarinic acid pathway 370 7 C4H (125) View species results
Steroid pathway 224 14 CAS (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3333 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 761 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Cyed0A1G0041000 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Cyed0A2G0003170 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Cyed0A2G0003550 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Cyed0A2G0003580 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Cyed0A2G0014110 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A2G0017530 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Cyed0A2G0017540 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Cyed0A2G0024700 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Cyed0A2G0025400 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Cyed0A2G0027080 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Cyed0A2G0028700 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Cyed0A2G0029530 Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
Cyed0A2G0030600 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Cyed0A2G0030900 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Cyed0A2G0031830 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Cyed0A2G0033920 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Cyed0A2G0034660 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Cyed0A2G0035290 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
Cyed0A2G0039470 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Cyed0A2G0040640 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Cyed0A2G0040650 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Cyed0A3G0000510 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Cyed0A3G0001000 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Cyed0A3G0002970 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Cyed0A3G0004860 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Cyed0A3G0006250 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Cyed0A3G0010500 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Cyed0A3G0010710 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0011260 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Cyed0A3G0011280 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Cyed0A3G0011330 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Cyed0A3G0011380 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Cyed0A3G0011400 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Cyed0A3G0011520 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0017190 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Cyed0A3G0017310 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Cyed0A3G0017370 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
Cyed0A3G0020100 Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
Cyed0A3G0020110 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Cyed0A3G0020120 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0021690 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Cyed0A3G0023270 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Cyed0A3G0026340 Terpenoid BAHD low borderline BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Cyed0A3G0028130 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Cyed0A3G0029700 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Cyed0A3G0030480 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0030520 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0030530 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0030540 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cyed0A3G0030590 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH