PlantSME Plant secondary metabolism enzyme database

Chloranthus sessilifolius (chloranthus_sessilifolius)

Imported from atlas release summary for Chloranthus sessilifolius.

1299
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.18% Alkaloid pathway 20.86% Phenylpropanoid pathway 18.94% Flavonoid pathway 12.63% Rosmarinic acid pathway 10.39% Steroid pathway 6.0%
Family Distribution
C4H 7.63% C3'H/CYP98A 6.2% BAHD 4.92% CYP76 4.32% IFS 4.01% POD 3.59% T3O 3.36% UGT 3.23%
Other Families 62.74%
More Families (98)
UFGT 115 2.99% 4CL 114 2.97% 7DLGT 113 2.94% DWF4/CYP90B1 104 2.71% F3H 84 2.19% BR6OX2/CYP85A2 78 2.03% F3'H/CYP75B 76 1.98% NMT 73 1.9% CAD 73 1.9% STR 68 1.77% CAS 68 1.77% TPS 66 1.72% GES 62 1.61% CODM/T6ODM 58 1.51% CYP71 56 1.46% DXS 54 1.41% G8O/G8H 44 1.15% H6H 42 1.09% HCT 41 1.07% T16H 40 1.04% SMT1/SMT2/SMT3 37 0.96% CSE 34 0.89% TRI/TRII 33 0.86% PAL 33 0.86% FNS 32 0.83% RAS 31 0.81% IFR 30 0.78% PYKS 28 0.73% LAC 26 0.68% GS 25 0.65% F3'5'H/CYP75A 25 0.65% TAT 25 0.65% CYP51G1 24 0.62% IO 23 0.6% CYP90D1 23 0.6% HMGR 23 0.6% SGD 22 0.57% F5H/CYP84A 22 0.57% COMT 22 0.57% BR6OX1/CYP85A1 22 0.57% CYP719 20 0.52% 7DLH 20 0.52% PMT 19 0.49% CCR 19 0.49% CPD/CYP90A1 19 0.49% AACT 19 0.49% MPO 18 0.47% ANR 17 0.44% SLS 16 0.42% NCS 15 0.39% FLS 14 0.36% LAMT 13 0.34% COR 13 0.34% 16OMT 13 0.34% CPR 13 0.34% 8HGO 12 0.31% GGPPS 12 0.31% DXR 12 0.31% FPPS 10 0.26% DFR 9 0.23% ROT3/CYP90C1 9 0.23% ANS/LDOX 8 0.21% SQE 8 0.21% MVD 8 0.21% BBE 7 0.18% CHS 7 0.18% CYP80B1 6 0.16% TYDC_DDC 6 0.16% SQS/FDFT1 6 0.16% HDR/IspH 6 0.16% CNMT 5 0.13% CHI 5 0.13% HPPR 5 0.13% ISY 4 0.1% CYP80F1 4 0.1% MVK 4 0.1% CCoAOMT 3 0.08% DET2 3 0.08% SMO1/SMO2 3 0.08% CMK/IspE 3 0.08% HMGS 3 0.08% ODC 2 0.05% XMT_MXMT_DXMT 2 0.05% TDC 2 0.05% DWF7 2 0.05% DWF1 2 0.05% MDS/IspF 2 0.05% MCT/IspD 2 0.05% GPPS 2 0.05% ADC 1 0.03% 6OMT_4OMT_SOMT 1 0.03% DWF5 1 0.03% FK 1 0.03% CPI1 1 0.03% HYD1 1 0.03% IDI 1 0.03% PMK 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 405 20 BAHD (125) View species results
Alkaloid pathway 271 23 GES (46) View species results
Phenylpropanoid pathway 246 12 POD (102) View species results
Flavonoid pathway 164 8 UFGT (106) View species results
Rosmarinic acid pathway 135 7 C4H (62) View species results
Steroid pathway 78 12 CAS (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1611 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status Best Target
Cses13G0001310.1 Alkaloid 7DLGT high pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses13G0004480.1 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses13G0004510.1 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses13G0004640.1 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses14G0000680.1 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses14G0004460.1 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Cses14G0004470.1 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Cses14G0004480.1 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses14G0004530.1 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Cses14G0006860.1 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses14G0006870.1 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses15G0013040.1 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Cses15G0013140.1 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO