PlantSME Plant secondary metabolism enzyme database

Cinnamomum kanehirae (cinnamomum_kanehirae)

Imported from atlas release summary for Cinnamomum kanehirae.

2166
Candidate Protein Records
1967
Pathway-Level Records
4940
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.3% Alkaloid pathway 22.01% Phenylpropanoid pathway 20.39% Flavonoid pathway 11.03% Rosmarinic acid pathway 8.59% Steroid pathway 7.68%
Family Distribution
C4H 7.02% C3'H/CYP98A 6.28% BAHD 5.26% IFS 4.41% CYP76 4.25% UGT 3.77% T3O 3.36% POD 3.34%
Other Families 62.31%
More Families (96)
DWF4/CYP90B1 160 3.24% 7DLGT 155 3.14% TPS 153 3.1% UFGT 150 3.04% GES 145 2.94% 4CL 120 2.43% CAS 107 2.17% CAD 102 2.06% F3'H/CYP75B 97 1.96% F3H 90 1.82% SMT1/SMT2/SMT3 78 1.58% STR 74 1.5% NMT 67 1.36% BR6OX2/CYP85A2 67 1.36% CYP71 67 1.36% TRI/TRII 62 1.26% COMT 56 1.13% CODM/T6ODM 54 1.09% CSE 49 0.99% HCT 48 0.97% RAS 47 0.95% T16H 44 0.89% G8O/G8H 44 0.89% 7DLH 43 0.87% H6H 43 0.87% 16OMT 42 0.85% CYP719 39 0.79% IFR 37 0.75% CYP90D1 37 0.75% LAC 36 0.73% CCR 35 0.71% PYKS 33 0.67% F3'5'H/CYP75A 33 0.67% IO 32 0.65% PMT 31 0.63% CYP51G1 31 0.63% GS 30 0.61% F5H/CYP84A 28 0.57% FNS 27 0.55% ANR 26 0.53% COR 25 0.51% PAL 24 0.49% BR6OX1/CYP85A1 24 0.49% SGD 23 0.47% CPD/CYP90A1 22 0.45% SLS 21 0.43% TAT 21 0.43% NCS 20 0.4% DFR 19 0.38% LAMT 18 0.36% TYDC_DDC 13 0.26% CPR 13 0.26% CNMT 12 0.24% CCoAOMT 12 0.24% CYP80B1 11 0.22% MPO 11 0.22% ROT3/CYP90C1 11 0.22% AACT 11 0.22% 8HGO 10 0.2% BBE 9 0.18% ANS/LDOX 8 0.16% CHS 8 0.16% SMO1/SMO2 8 0.16% GGPPS 8 0.16% TDC 7 0.14% ISY 6 0.12% SQS/FDFT1 6 0.12% DXS 6 0.12% CHI 5 0.1% DET2 5 0.1% MVK 5 0.1% XMT_MXMT_DXMT 4 0.08% HPPR 4 0.08% SQE 4 0.08% IDI 4 0.08% FPPS 4 0.08% MVD 4 0.08% DWF7 3 0.06% HDR/IspH 3 0.06% CYP80F1 2 0.04% 6OMT_4OMT_SOMT 2 0.04% FLS 2 0.04% DWF1 2 0.04% HMGR 2 0.04% CMK/IspE 2 0.04% HMGS 2 0.04% DXR 2 0.04% HDS/IspG 2 0.04% MCT/IspD 2 0.04% ODC 1 0.02% ADC 1 0.02% CPI1 1 0.02% FK 1 0.02% HYD1 1 0.02% DWF5 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 596 18 BAHD (197) View species results
Alkaloid pathway 433 25 GES (126) View species results
Phenylpropanoid pathway 401 12 POD (146) View species results
Flavonoid pathway 217 12 UFGT (138) View species results
Rosmarinic acid pathway 169 7 C4H (79) View species results
Steroid pathway 151 13 CAS (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2064 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 355 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
CkanCKAN.scaff00120266030.1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
CkanCKAN.scaff00120266870.1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
CkanCKAN.scaff00140270440.1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
CkanCKAN.scaff00550272490.1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
CkanCKAN.scaff02140273850.1 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
CkanCKAN.scaff02590274200.1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
CkanCKAN.scaff03650274770.1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
CkanCKAN.scaff03650274780.1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
CkanCKAN.scaff04190275320.1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
CkanCKAN.scaff04870275720.1 Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH