Cinnamomum kanehirae (cinnamomum_kanehirae)
Imported from atlas release summary for Cinnamomum kanehirae.
1967
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1967
Candidate Genes
C4H
7.02%
C3'H/CYP98A
6.28%
BAHD
5.26%
IFS
4.41%
CYP76
4.25%
UGT
3.77%
T3O
3.36%
POD
3.34%
Other Families
62.31%
More Families (96)
DWF4/CYP90B1
160
3.24%
7DLGT
155
3.14%
TPS
153
3.1%
UFGT
150
3.04%
GES
145
2.94%
4CL
120
2.43%
CAS
107
2.17%
CAD
102
2.06%
F3'H/CYP75B
97
1.96%
F3H
90
1.82%
SMT1/SMT2/SMT3
78
1.58%
STR
74
1.5%
NMT
67
1.36%
BR6OX2/CYP85A2
67
1.36%
CYP71
67
1.36%
TRI/TRII
62
1.26%
COMT
56
1.13%
CODM/T6ODM
54
1.09%
CSE
49
0.99%
HCT
48
0.97%
RAS
47
0.95%
T16H
44
0.89%
G8O/G8H
44
0.89%
7DLH
43
0.87%
H6H
43
0.87%
16OMT
42
0.85%
CYP719
39
0.79%
IFR
37
0.75%
CYP90D1
37
0.75%
LAC
36
0.73%
CCR
35
0.71%
PYKS
33
0.67%
F3'5'H/CYP75A
33
0.67%
IO
32
0.65%
PMT
31
0.63%
CYP51G1
31
0.63%
GS
30
0.61%
F5H/CYP84A
28
0.57%
FNS
27
0.55%
ANR
26
0.53%
COR
25
0.51%
PAL
24
0.49%
BR6OX1/CYP85A1
24
0.49%
SGD
23
0.47%
CPD/CYP90A1
22
0.45%
SLS
21
0.43%
TAT
21
0.43%
NCS
20
0.4%
DFR
19
0.38%
LAMT
18
0.36%
TYDC_DDC
13
0.26%
CPR
13
0.26%
CNMT
12
0.24%
CCoAOMT
12
0.24%
CYP80B1
11
0.22%
MPO
11
0.22%
ROT3/CYP90C1
11
0.22%
AACT
11
0.22%
8HGO
10
0.2%
BBE
9
0.18%
ANS/LDOX
8
0.16%
CHS
8
0.16%
SMO1/SMO2
8
0.16%
GGPPS
8
0.16%
TDC
7
0.14%
ISY
6
0.12%
SQS/FDFT1
6
0.12%
DXS
6
0.12%
CHI
5
0.1%
DET2
5
0.1%
MVK
5
0.1%
XMT_MXMT_DXMT
4
0.08%
HPPR
4
0.08%
SQE
4
0.08%
IDI
4
0.08%
FPPS
4
0.08%
MVD
4
0.08%
DWF7
3
0.06%
HDR/IspH
3
0.06%
CYP80F1
2
0.04%
6OMT_4OMT_SOMT
2
0.04%
FLS
2
0.04%
DWF1
2
0.04%
HMGR
2
0.04%
CMK/IspE
2
0.04%
HMGS
2
0.04%
DXR
2
0.04%
HDS/IspG
2
0.04%
MCT/IspD
2
0.04%
ODC
1
0.02%
ADC
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
HYD1
1
0.02%
DWF5
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 596 | 18 | BAHD (197) | View species results |
| Alkaloid pathway | 433 | 25 | GES (126) | View species results |
| Phenylpropanoid pathway | 401 | 12 | POD (146) | View species results |
| Flavonoid pathway | 217 | 12 | UFGT (138) | View species results |
| Rosmarinic acid pathway | 169 | 7 | C4H (79) | View species results |
| Steroid pathway | 151 | 13 | CAS (80) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2064 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 355 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CkanCKAN.scaff00090223620.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CkanCKAN.scaff00100225240.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| CkanCKAN.scaff00100227220.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| CkanCKAN.scaff00100227280.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| CkanCKAN.scaff00100231120.1 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| CkanCKAN.scaff00110241120.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| CkanCKAN.scaff00110243040.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| CkanCKAN.scaff00110245520.1 | Alkaloid | NMT | medium | pass | NMT__00027__sp_Q10MI4_EZ1_ORYSJ |
| CkanCKAN.scaff00110246330.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| CkanCKAN.scaff00110250150.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| CkanCKAN.scaff00120256400.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| CkanCKAN.scaff00120258490.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| CkanCKAN.scaff00120259210.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| CkanCKAN.scaff00120263010.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CkanCKAN.scaff00120266790.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| CkanCKAN.scaff00120266810.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| CkanCKAN.scaff00130269680.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |