Citrus australis (citrus_australis)
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Imported from atlas release summary for Citrus australis.
1683
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1683
Candidate Genes
BAHD
5.18%
C4H
5.16%
C3'H/CYP98A
4.88%
UGT
4.54%
CYP76
3.9%
POD
3.67%
NMT
3.62%
7DLGT
3.39%
Other Families
65.66%
More Families (97)
4CL
132
3.39%
UFGT
118
3.03%
IFS
114
2.93%
F3H
86
2.21%
DWF4/CYP90B1
84
2.16%
TPS
83
2.13%
COMT
81
2.08%
T3O
75
1.93%
CAS
71
1.82%
GES
70
1.8%
F3'H/CYP75B
69
1.77%
STR
66
1.69%
BR6OX2/CYP85A2
63
1.62%
CODM/T6ODM
60
1.54%
CAD
57
1.46%
T16H
56
1.44%
TRI/TRII
52
1.33%
G8O/G8H
50
1.28%
H6H
48
1.23%
HCT
44
1.13%
SMT1/SMT2/SMT3
42
1.08%
PYKS
40
1.03%
F3'5'H/CYP75A
39
1.0%
IFR
37
0.95%
RAS
37
0.95%
GS
35
0.9%
SGD
32
0.82%
FNS
32
0.82%
F5H/CYP84A
32
0.82%
LAC
30
0.77%
CSE
30
0.77%
CYP90D1
29
0.74%
ANR
28
0.72%
ANS/LDOX
27
0.69%
16OMT
26
0.67%
IO
26
0.67%
NCS
26
0.67%
CYP71
26
0.67%
CCR
25
0.64%
TAT
25
0.64%
7DLH
24
0.62%
PAL
24
0.62%
GGPPS
23
0.59%
ISY
22
0.56%
CPD/CYP90A1
22
0.56%
8HGO
21
0.54%
CYP80B1
20
0.51%
COR
20
0.51%
CHS
18
0.46%
CNMT
17
0.44%
SLS
16
0.41%
PMT
15
0.39%
LAMT
13
0.33%
HPPR
12
0.31%
TYDC_DDC
11
0.28%
DFR
11
0.28%
ROT3/CYP90C1
11
0.28%
XMT_MXMT_DXMT
10
0.26%
CCoAOMT
10
0.26%
FPPS
10
0.26%
MPO
9
0.23%
AACT
9
0.23%
6OMT_4OMT_SOMT
7
0.18%
CYP719
7
0.18%
SQE
7
0.18%
BR6OX1/CYP85A1
6
0.15%
SQS/FDFT1
6
0.15%
DXS
6
0.15%
BBE
5
0.13%
CPR
5
0.13%
MVK
5
0.13%
CHI
4
0.1%
FLS
4
0.1%
HYD1
4
0.1%
CYP51G1
4
0.1%
MVD
4
0.1%
ODC
3
0.08%
TDC
2
0.05%
SMO1/SMO2
2
0.05%
DWF7
2
0.05%
DET2
2
0.05%
MCT/IspD
2
0.05%
HMGR
2
0.05%
MDS/IspF
2
0.05%
DXR
2
0.05%
HMGS
2
0.05%
HDR/IspH
2
0.05%
ADC
1
0.03%
DWF5
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
CMK/IspE
1
0.03%
PMK
1
0.03%
IDI
1
0.03%
GPPS
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 501 | 18 | BAHD (160) | View species results |
| Alkaloid pathway | 419 | 28 | NMT (69) | View species results |
| Phenylpropanoid pathway | 372 | 12 | POD (131) | View species results |
| Flavonoid pathway | 173 | 11 | UFGT (91) | View species results |
| Rosmarinic acid pathway | 114 | 7 | 4CL (32) | View species results |
| Steroid pathway | 104 | 13 | CAS (54) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1316 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 283 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| citrus_australis_GWHPBQDX015875 | Alkaloid | GES | medium | pass | GES__00011__sp_R9QMR5_ATERP_PINBN |
| citrus_australis_GWHPBQDX016884 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| citrus_australis_GWHPBQDX016998 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| citrus_australis_GWHPBQDX017004 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| citrus_australis_GWHPBQDX017818 | Alkaloid | GES | low | borderline | GES__00011__sp_R9QMR5_ATERP_PINBN |
| citrus_australis_GWHPBQDX017819 | Alkaloid | GES | low | borderline | GES__00011__sp_R9QMR5_ATERP_PINBN |
| citrus_australis_GWHPBQDX017820 | Alkaloid | GES | low | borderline | GES__00011__sp_R9QMR5_ATERP_PINBN |
| citrus_australis_GWHPBQDX022631 | Alkaloid | GES | low | borderline | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| citrus_australis_GWHPBQDX027028 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| citrus_australis_GWHPBQDX027346 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| citrus_australis_GWHPBQDX027958 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| citrus_australis_GWHPBQDX028229 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| citrus_australis_GWHPBQDX028235 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| citrus_australis_GWHPBQDX028236 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| citrus_australis_GWHPBQDX028238 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| citrus_australis_GWHPBQDX028240 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| citrus_australis_GWHPBQDX028241 | Alkaloid | GES | medium | pass | GES__00005__sp_Q308N0_GRNL6_PERFR |
| citrus_australis_GWHPBQDX030728 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| citrus_australis_GWHPBQDX031939 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |
| citrus_australis_GWHPBQDX031940 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |