Colocasia esculenta (colocasia_esculenta)
Imported from atlas release summary for Colocasia esculenta.
1288
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1288
Candidate Genes
BAHD
6.85%
C3'H/CYP98A
5.76%
4CL
5.38%
C4H
5.1%
POD
4.92%
UGT
4.25%
7DLGT
3.59%
IFS
3.3%
Other Families
60.84%
More Families (95)
UFGT
93
3.27%
CYP76
88
3.09%
T3O
84
2.95%
DWF4/CYP90B1
63
2.21%
NMT
62
2.18%
F3H
58
2.04%
BR6OX2/CYP85A2
58
2.04%
F3'H/CYP75B
53
1.86%
STR
51
1.79%
CAS
46
1.62%
CAD
45
1.58%
SMT1/SMT2/SMT3
43
1.51%
IFR
41
1.44%
TRI/TRII
39
1.37%
CSE
38
1.34%
TPS
37
1.3%
GES
33
1.16%
RAS
33
1.16%
CYP71
32
1.12%
CODM/T6ODM
31
1.09%
SLS
30
1.05%
HCT
30
1.05%
PYKS
29
1.02%
LAC
28
0.98%
SGD
27
0.95%
H6H
26
0.91%
CYP90D1
23
0.81%
ANR
22
0.77%
IO
21
0.74%
GS
21
0.74%
F3'5'H/CYP75A
21
0.74%
PAL
21
0.74%
PMT
20
0.7%
CCR
18
0.63%
NCS
16
0.56%
8HGO
16
0.56%
T16H
15
0.53%
LAMT
14
0.49%
COMT
14
0.49%
FPPS
14
0.49%
G8O/G8H
13
0.46%
7DLH
13
0.46%
FNS
13
0.46%
CYP51G1
11
0.39%
DXS
11
0.39%
CYP719
10
0.35%
CNMT
10
0.35%
ROT3/CYP90C1
10
0.35%
16OMT
9
0.32%
BBE
9
0.32%
CPR
9
0.32%
TAT
9
0.32%
COR
8
0.28%
CHS
8
0.28%
CPD/CYP90A1
8
0.28%
BR6OX1/CYP85A1
8
0.28%
SMO1/SMO2
8
0.28%
MPO
6
0.21%
DFR
6
0.21%
CCoAOMT
6
0.21%
MVK
6
0.21%
AACT
6
0.21%
TDC
5
0.18%
ISY
4
0.14%
TYDC_DDC
4
0.14%
ADC
4
0.14%
ANS/LDOX
4
0.14%
SQS/FDFT1
4
0.14%
HMGR
4
0.14%
GGPPS
4
0.14%
XMT_MXMT_DXMT
3
0.11%
CHI
3
0.11%
FLS
3
0.11%
F5H/CYP84A
3
0.11%
HYD1
3
0.11%
DET2
3
0.11%
MVD
3
0.11%
6OMT_4OMT_SOMT
2
0.07%
CYP80B1
2
0.07%
HPPR
2
0.07%
SQE
2
0.07%
CMK/IspE
2
0.07%
MCT/IspD
2
0.07%
PMK
2
0.07%
HDR/IspH
2
0.07%
CPI1
1
0.04%
FK
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
DWF1
1
0.04%
IDI
1
0.04%
DXR
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
HDS/IspG
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 369 | 20 | BAHD (149) | View species results |
| Phenylpropanoid pathway | 296 | 11 | POD (135) | View species results |
| Alkaloid pathway | 266 | 22 | 7DLGT (47) | View species results |
| Flavonoid pathway | 166 | 10 | UFGT (85) | View species results |
| Rosmarinic acid pathway | 116 | 7 | C4H (39) | View species results |
| Steroid pathway | 75 | 11 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 969 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 258 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| colocasia_esculenta_EVM0000171.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| colocasia_esculenta_EVM0000573.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| colocasia_esculenta_EVM0000717.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| colocasia_esculenta_EVM0001363.2 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0001521.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| colocasia_esculenta_EVM0001854.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| colocasia_esculenta_EVM0003355.1 | Flavonoid | 4CL | low | borderline | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| colocasia_esculenta_EVM0003528.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| colocasia_esculenta_EVM0005210.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| colocasia_esculenta_EVM0006148.1 | Flavonoid | 4CL | medium | pass | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| colocasia_esculenta_EVM0006468.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| colocasia_esculenta_EVM0006659.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0007130.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| colocasia_esculenta_EVM0007617.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| colocasia_esculenta_EVM0008306.1 | Flavonoid | 4CL | medium | pass | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| colocasia_esculenta_EVM0009206.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| colocasia_esculenta_EVM0009895.2 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0011200.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| colocasia_esculenta_EVM0012335.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| colocasia_esculenta_EVM0012881.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0013190.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| colocasia_esculenta_EVM0013607.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0014421.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0015447.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| colocasia_esculenta_EVM0015530.1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| colocasia_esculenta_EVM0015540.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| colocasia_esculenta_EVM0015784.1 | Flavonoid | 4CL | medium | pass | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| colocasia_esculenta_EVM0017858.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| colocasia_esculenta_EVM0018098.1 | Flavonoid | 4CL | low | borderline | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| colocasia_esculenta_EVM0018370.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| colocasia_esculenta_EVM0018424.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| colocasia_esculenta_EVM0019137.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0019955.1 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| colocasia_esculenta_EVM0020356.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0020465.1 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0020909.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0021783.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0022535.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| colocasia_esculenta_EVM0022713.2 | Flavonoid | 4CL | low | borderline | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| colocasia_esculenta_EVM0023448.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0024964.2 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0025286.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| colocasia_esculenta_EVM0025552.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| colocasia_esculenta_EVM0025727.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| colocasia_esculenta_EVM0025997.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0026391.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0026727.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| colocasia_esculenta_EVM0027948.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| colocasia_esculenta_EVM0028286.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| colocasia_esculenta_EVM0028500.1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |