Colocasia esculenta (colocasia_esculenta)
Imported from atlas release summary for Colocasia esculenta.
1288
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1288
Candidate Genes
BAHD
6.85%
C3'H/CYP98A
5.76%
4CL
5.38%
C4H
5.1%
POD
4.92%
UGT
4.25%
7DLGT
3.59%
IFS
3.3%
Other Families
60.84%
More Families (95)
UFGT
93
3.27%
CYP76
88
3.09%
T3O
84
2.95%
DWF4/CYP90B1
63
2.21%
NMT
62
2.18%
F3H
58
2.04%
BR6OX2/CYP85A2
58
2.04%
F3'H/CYP75B
53
1.86%
STR
51
1.79%
CAS
46
1.62%
CAD
45
1.58%
SMT1/SMT2/SMT3
43
1.51%
IFR
41
1.44%
TRI/TRII
39
1.37%
CSE
38
1.34%
TPS
37
1.3%
GES
33
1.16%
RAS
33
1.16%
CYP71
32
1.12%
CODM/T6ODM
31
1.09%
SLS
30
1.05%
HCT
30
1.05%
PYKS
29
1.02%
LAC
28
0.98%
SGD
27
0.95%
H6H
26
0.91%
CYP90D1
23
0.81%
ANR
22
0.77%
IO
21
0.74%
GS
21
0.74%
F3'5'H/CYP75A
21
0.74%
PAL
21
0.74%
PMT
20
0.7%
CCR
18
0.63%
NCS
16
0.56%
8HGO
16
0.56%
T16H
15
0.53%
LAMT
14
0.49%
COMT
14
0.49%
FPPS
14
0.49%
G8O/G8H
13
0.46%
7DLH
13
0.46%
FNS
13
0.46%
CYP51G1
11
0.39%
DXS
11
0.39%
CYP719
10
0.35%
CNMT
10
0.35%
ROT3/CYP90C1
10
0.35%
16OMT
9
0.32%
BBE
9
0.32%
CPR
9
0.32%
TAT
9
0.32%
COR
8
0.28%
CHS
8
0.28%
CPD/CYP90A1
8
0.28%
BR6OX1/CYP85A1
8
0.28%
SMO1/SMO2
8
0.28%
MPO
6
0.21%
DFR
6
0.21%
CCoAOMT
6
0.21%
MVK
6
0.21%
AACT
6
0.21%
TDC
5
0.18%
ISY
4
0.14%
TYDC_DDC
4
0.14%
ADC
4
0.14%
ANS/LDOX
4
0.14%
SQS/FDFT1
4
0.14%
HMGR
4
0.14%
GGPPS
4
0.14%
XMT_MXMT_DXMT
3
0.11%
CHI
3
0.11%
FLS
3
0.11%
F5H/CYP84A
3
0.11%
HYD1
3
0.11%
DET2
3
0.11%
MVD
3
0.11%
6OMT_4OMT_SOMT
2
0.07%
CYP80B1
2
0.07%
HPPR
2
0.07%
SQE
2
0.07%
CMK/IspE
2
0.07%
MCT/IspD
2
0.07%
PMK
2
0.07%
HDR/IspH
2
0.07%
CPI1
1
0.04%
FK
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
DWF1
1
0.04%
IDI
1
0.04%
DXR
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
HDS/IspG
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 369 | 20 | BAHD (149) | View species results |
| Phenylpropanoid pathway | 296 | 11 | POD (135) | View species results |
| Alkaloid pathway | 266 | 22 | 7DLGT (47) | View species results |
| Flavonoid pathway | 166 | 10 | UFGT (85) | View species results |
| Rosmarinic acid pathway | 116 | 7 | C4H (39) | View species results |
| Steroid pathway | 75 | 11 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 969 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 258 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| colocasia_esculenta_EVM0000131.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| colocasia_esculenta_EVM0000147.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| colocasia_esculenta_EVM0000368.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| colocasia_esculenta_EVM0002025.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| colocasia_esculenta_EVM0002268.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| colocasia_esculenta_EVM0003069.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| colocasia_esculenta_EVM0003471.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| colocasia_esculenta_EVM0003531.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| colocasia_esculenta_EVM0003882.2 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| colocasia_esculenta_EVM0003906.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| colocasia_esculenta_EVM0004460.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| colocasia_esculenta_EVM0005310.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| colocasia_esculenta_EVM0005512.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| colocasia_esculenta_EVM0005579.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| colocasia_esculenta_EVM0005973.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| colocasia_esculenta_EVM0007344.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| colocasia_esculenta_EVM0007461.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| colocasia_esculenta_EVM0007646.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| colocasia_esculenta_EVM0007941.1 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| colocasia_esculenta_EVM0008414.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| colocasia_esculenta_EVM0009285.3 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| colocasia_esculenta_EVM0010121.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| colocasia_esculenta_EVM0011267.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| colocasia_esculenta_EVM0012272.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| colocasia_esculenta_EVM0012454.1 | Alkaloid | NMT | medium | borderline | NMT__00044__sp_Q8H0D3_DXMT2_COFAR |
| colocasia_esculenta_EVM0012786.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| colocasia_esculenta_EVM0013381.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| colocasia_esculenta_EVM0013582.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| colocasia_esculenta_EVM0013643.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| colocasia_esculenta_EVM0014398.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| colocasia_esculenta_EVM0015463.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| colocasia_esculenta_EVM0015930.1 | Alkaloid | NMT | medium | pass | NMT__00027__sp_Q10MI4_EZ1_ORYSJ |
| colocasia_esculenta_EVM0016028.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| colocasia_esculenta_EVM0016059.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| colocasia_esculenta_EVM0016373.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| colocasia_esculenta_EVM0016881.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| colocasia_esculenta_EVM0016911.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| colocasia_esculenta_EVM0017393.2 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| colocasia_esculenta_EVM0017775.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| colocasia_esculenta_EVM0019996.1 | Alkaloid | NMT | medium | borderline | NMT__00052__sp_Q9AVJ9_MXMT1_COFAR |
| colocasia_esculenta_EVM0020077.3 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| colocasia_esculenta_EVM0020100.2 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| colocasia_esculenta_EVM0020141.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| colocasia_esculenta_EVM0020251.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| colocasia_esculenta_EVM0020947.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| colocasia_esculenta_EVM0021055.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| colocasia_esculenta_EVM0021393.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| colocasia_esculenta_EVM0021498.1 | Alkaloid | NMT | medium | borderline | NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ |
| colocasia_esculenta_EVM0022494.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| colocasia_esculenta_EVM0023317.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |