PlantSME Plant secondary metabolism enzyme database

Colocasia esculenta (colocasia_esculenta)

Imported from atlas release summary for Colocasia esculenta.

1288
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.65% Phenylpropanoid pathway 22.98% Alkaloid pathway 20.65% Flavonoid pathway 12.89% Rosmarinic acid pathway 9.01% Steroid pathway 5.82%
Family Distribution
BAHD 6.85% C3'H/CYP98A 5.76% 4CL 5.38% C4H 5.1% POD 4.92% UGT 4.25% 7DLGT 3.59% IFS 3.3%
Other Families 60.84%
More Families (95)
UFGT 93 3.27% CYP76 88 3.09% T3O 84 2.95% DWF4/CYP90B1 63 2.21% NMT 62 2.18% F3H 58 2.04% BR6OX2/CYP85A2 58 2.04% F3'H/CYP75B 53 1.86% STR 51 1.79% CAS 46 1.62% CAD 45 1.58% SMT1/SMT2/SMT3 43 1.51% IFR 41 1.44% TRI/TRII 39 1.37% CSE 38 1.34% TPS 37 1.3% GES 33 1.16% RAS 33 1.16% CYP71 32 1.12% CODM/T6ODM 31 1.09% SLS 30 1.05% HCT 30 1.05% PYKS 29 1.02% LAC 28 0.98% SGD 27 0.95% H6H 26 0.91% CYP90D1 23 0.81% ANR 22 0.77% IO 21 0.74% GS 21 0.74% F3'5'H/CYP75A 21 0.74% PAL 21 0.74% PMT 20 0.7% CCR 18 0.63% NCS 16 0.56% 8HGO 16 0.56% T16H 15 0.53% LAMT 14 0.49% COMT 14 0.49% FPPS 14 0.49% G8O/G8H 13 0.46% 7DLH 13 0.46% FNS 13 0.46% CYP51G1 11 0.39% DXS 11 0.39% CYP719 10 0.35% CNMT 10 0.35% ROT3/CYP90C1 10 0.35% 16OMT 9 0.32% BBE 9 0.32% CPR 9 0.32% TAT 9 0.32% COR 8 0.28% CHS 8 0.28% CPD/CYP90A1 8 0.28% BR6OX1/CYP85A1 8 0.28% SMO1/SMO2 8 0.28% MPO 6 0.21% DFR 6 0.21% CCoAOMT 6 0.21% MVK 6 0.21% AACT 6 0.21% TDC 5 0.18% ISY 4 0.14% TYDC_DDC 4 0.14% ADC 4 0.14% ANS/LDOX 4 0.14% SQS/FDFT1 4 0.14% HMGR 4 0.14% GGPPS 4 0.14% XMT_MXMT_DXMT 3 0.11% CHI 3 0.11% FLS 3 0.11% F5H/CYP84A 3 0.11% HYD1 3 0.11% DET2 3 0.11% MVD 3 0.11% 6OMT_4OMT_SOMT 2 0.07% CYP80B1 2 0.07% HPPR 2 0.07% SQE 2 0.07% CMK/IspE 2 0.07% MCT/IspD 2 0.07% PMK 2 0.07% HDR/IspH 2 0.07% CPI1 1 0.04% FK 1 0.04% DWF7 1 0.04% DWF5 1 0.04% DWF1 1 0.04% IDI 1 0.04% DXR 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04% HDS/IspG 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 369 20 BAHD (149) View species results
Phenylpropanoid pathway 296 11 POD (135) View species results
Alkaloid pathway 266 22 7DLGT (47) View species results
Flavonoid pathway 166 10 UFGT (85) View species results
Rosmarinic acid pathway 116 7 C4H (39) View species results
Steroid pathway 75 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 969 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
colocasia_esculenta_EVM0023879.1 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
colocasia_esculenta_EVM0024232.1 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
colocasia_esculenta_EVM0024300.1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
colocasia_esculenta_EVM0024613.1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
colocasia_esculenta_EVM0025049.1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
colocasia_esculenta_EVM0025461.1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
colocasia_esculenta_EVM0026193.1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
colocasia_esculenta_EVM0026301.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
colocasia_esculenta_EVM0026339.1 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
colocasia_esculenta_EVM0027765.1 Alkaloid NMT medium pass NMT__00027__sp_Q10MI4_EZ1_ORYSJ
colocasia_esculenta_EVM0028097.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
colocasia_esculenta_EVM0028608.1 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH