Conocephalum conicum (conocephalum_conicum)
Imported from atlas release summary for Conocephalum conicum.
647
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
647
Candidate Genes
POD
9.5%
C4H
8.09%
C3'H/CYP98A
6.39%
CYP76
4.64%
BAHD
4.19%
T3O
3.11%
4CL
3.05%
NMT
2.83%
Other Families
58.2%
More Families (97)
IFS
46
2.6%
BR6OX2/CYP85A2
43
2.43%
DWF4/CYP90B1
39
2.21%
UGT
38
2.15%
7DLGT
36
2.04%
STR
36
2.04%
UFGT
35
1.98%
F3'H/CYP75B
33
1.87%
F3'5'H/CYP75A
31
1.75%
PAL
30
1.7%
F3H
29
1.64%
CSE
28
1.58%
TRI/TRII
24
1.36%
HCT
23
1.3%
IFR
21
1.19%
CODM/T6ODM
20
1.13%
H6H
20
1.13%
G8O/G8H
20
1.13%
RAS
20
1.13%
FNS
19
1.07%
TPS
18
1.02%
T16H
17
0.96%
CAS
17
0.96%
PYKS
15
0.85%
GS
15
0.85%
CAD
14
0.79%
CYP71
14
0.79%
CHS
13
0.74%
SMT1/SMT2/SMT3
13
0.74%
BR6OX1/CYP85A1
13
0.74%
COR
11
0.62%
IO
11
0.62%
CYP719
11
0.62%
SLS
10
0.57%
7DLH
10
0.57%
ANS/LDOX
10
0.57%
F5H/CYP84A
10
0.57%
ANR
9
0.51%
COMT
9
0.51%
TAT
9
0.51%
CYP80B1
8
0.45%
PMT
8
0.45%
NCS
8
0.45%
CCR
8
0.45%
CYP90D1
8
0.45%
CPD/CYP90A1
8
0.45%
GES
7
0.4%
CNMT
7
0.4%
LAMT
6
0.34%
CYP51G1
6
0.34%
DET2
6
0.34%
8HGO
5
0.28%
DFR
5
0.28%
CPR
5
0.28%
ROT3/CYP90C1
5
0.28%
AACT
5
0.28%
SGD
4
0.23%
BBE
4
0.23%
FLS
4
0.23%
SQS/FDFT1
4
0.23%
GGPPS
4
0.23%
FPPS
4
0.23%
TYDC_DDC
3
0.17%
6OMT_4OMT_SOMT
3
0.17%
LAC
3
0.17%
CCoAOMT
3
0.17%
DWF1
3
0.17%
MVK
3
0.17%
XMT_MXMT_DXMT
2
0.11%
16OMT
2
0.11%
ISY
2
0.11%
MPO
2
0.11%
CYP80F1
2
0.11%
CHI
2
0.11%
SMO1/SMO2
2
0.11%
DXS
2
0.11%
MCT/IspD
2
0.11%
MVD
2
0.11%
DXR
2
0.11%
HMGR
2
0.11%
HMGS
2
0.11%
ADC
1
0.06%
TDC
1
0.06%
ODC
1
0.06%
HPPR
1
0.06%
HYD1
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
SQE
1
0.06%
DWF5
1
0.06%
FK
1
0.06%
HDS/IspG
1
0.06%
HDR/IspH
1
0.06%
CMK/IspE
1
0.06%
IDI
1
0.06%
PMK
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 238 | 11 | POD (162) | View species results |
| Terpenoid pathway | 137 | 19 | BAHD (40) | View species results |
| Alkaloid pathway | 122 | 20 | T3O (28) | View species results |
| Flavonoid pathway | 66 | 8 | UFGT (32) | View species results |
| Rosmarinic acid pathway | 48 | 7 | C4H (22) | View species results |
| Steroid pathway | 36 | 11 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 738 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 117 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cconscaffold_10016280 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_10021650 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_20026440 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_20040590 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_30051470 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_30053120 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_40075180 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_40075790 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_40075800 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_40076910 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_40079700 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_40082640 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_40094500 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_50110020 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_50111590 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_50119710 | Flavonoid | 4CL | medium | pass |
| Cconscaffold_70149430 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_80171570 | Flavonoid | 4CL | low | borderline |
| Cconscaffold_10019230 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_30052090 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_40086630 | Flavonoid | ANR | low | borderline |
| Cconscaffold_40102050 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_50126250 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_50130000 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_60132630 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_60133780 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_60134300 | Flavonoid | ANR | medium | borderline |
| Cconscaffold_10002820 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_10018010 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_20028660 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_30063200 | Flavonoid | ANS/LDOX | low | borderline |
| Cconscaffold_40081430 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_40099330 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_50126070 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_60133870 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_60133880 | Flavonoid | ANS/LDOX | medium | borderline |
| Cconscaffold_70163230 | Flavonoid | ANS/LDOX | low | borderline |
| Cconscaffold_10002850 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_10004410 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_10020780 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_20035590 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_30052740 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_40081480 | Flavonoid | C4H | low | borderline |
| Cconscaffold_40100200 | Flavonoid | C4H | low | borderline |
| Cconscaffold_40100230 | Flavonoid | C4H | low | borderline |
| Cconscaffold_40103630 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_50130270 | Flavonoid | C4H | low | borderline |
| Cconscaffold_60135420 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_60135430 | Flavonoid | C4H | medium | borderline |
| Cconscaffold_60135440 | Flavonoid | C4H | medium | borderline |