Conocephalum conicum (conocephalum_conicum)
Imported from atlas release summary for Conocephalum conicum.
898
Candidate Protein Records
647
Pathway-Level Records
1768
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1768
Family-Level Calls
POD
9.5%
C4H
8.09%
C3'H/CYP98A
6.39%
CYP76
4.64%
BAHD
4.19%
T3O
3.11%
4CL
3.05%
NMT
2.83%
Other Families
58.2%
More Families (97)
IFS
46
2.6%
BR6OX2/CYP85A2
43
2.43%
DWF4/CYP90B1
39
2.21%
UGT
38
2.15%
7DLGT
36
2.04%
STR
36
2.04%
UFGT
35
1.98%
F3'H/CYP75B
33
1.87%
F3'5'H/CYP75A
31
1.75%
PAL
30
1.7%
F3H
29
1.64%
CSE
28
1.58%
TRI/TRII
24
1.36%
HCT
23
1.3%
IFR
21
1.19%
CODM/T6ODM
20
1.13%
H6H
20
1.13%
G8O/G8H
20
1.13%
RAS
20
1.13%
FNS
19
1.07%
TPS
18
1.02%
T16H
17
0.96%
CAS
17
0.96%
PYKS
15
0.85%
GS
15
0.85%
CAD
14
0.79%
CYP71
14
0.79%
CHS
13
0.74%
SMT1/SMT2/SMT3
13
0.74%
BR6OX1/CYP85A1
13
0.74%
COR
11
0.62%
IO
11
0.62%
CYP719
11
0.62%
SLS
10
0.57%
7DLH
10
0.57%
ANS/LDOX
10
0.57%
F5H/CYP84A
10
0.57%
ANR
9
0.51%
COMT
9
0.51%
TAT
9
0.51%
CYP80B1
8
0.45%
PMT
8
0.45%
NCS
8
0.45%
CCR
8
0.45%
CYP90D1
8
0.45%
CPD/CYP90A1
8
0.45%
GES
7
0.4%
CNMT
7
0.4%
LAMT
6
0.34%
CYP51G1
6
0.34%
DET2
6
0.34%
8HGO
5
0.28%
DFR
5
0.28%
CPR
5
0.28%
ROT3/CYP90C1
5
0.28%
AACT
5
0.28%
SGD
4
0.23%
BBE
4
0.23%
FLS
4
0.23%
SQS/FDFT1
4
0.23%
GGPPS
4
0.23%
FPPS
4
0.23%
TYDC_DDC
3
0.17%
6OMT_4OMT_SOMT
3
0.17%
LAC
3
0.17%
CCoAOMT
3
0.17%
DWF1
3
0.17%
MVK
3
0.17%
XMT_MXMT_DXMT
2
0.11%
16OMT
2
0.11%
ISY
2
0.11%
MPO
2
0.11%
CYP80F1
2
0.11%
CHI
2
0.11%
SMO1/SMO2
2
0.11%
DXS
2
0.11%
MCT/IspD
2
0.11%
MVD
2
0.11%
DXR
2
0.11%
HMGR
2
0.11%
HMGS
2
0.11%
ADC
1
0.06%
TDC
1
0.06%
ODC
1
0.06%
HPPR
1
0.06%
HYD1
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
SQE
1
0.06%
DWF5
1
0.06%
FK
1
0.06%
HDS/IspG
1
0.06%
HDR/IspH
1
0.06%
CMK/IspE
1
0.06%
IDI
1
0.06%
PMK
1
0.06%
MDS/IspF
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 238 | 11 | POD (162) | View species results |
| Terpenoid pathway | 137 | 19 | BAHD (40) | View species results |
| Alkaloid pathway | 122 | 20 | T3O (28) | View species results |
| Flavonoid pathway | 66 | 8 | UFGT (32) | View species results |
| Rosmarinic acid pathway | 48 | 7 | C4H (22) | View species results |
| Steroid pathway | 36 | 11 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 738 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 117 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cconscaffold_10011410 | Alkaloid | STR | low | borderline |
| Cconscaffold_10012820 | Alkaloid | STR | low | borderline |
| Cconscaffold_10013000 | Alkaloid | STR | low | borderline |
| Cconscaffold_10020340 | Alkaloid | STR | low | borderline |
| Cconscaffold_10022050 | Alkaloid | STR | low | borderline |
| Cconscaffold_30046200 | Alkaloid | STR | low | borderline |
| Cconscaffold_30046210 | Alkaloid | STR | low | borderline |
| Cconscaffold_30046240 | Alkaloid | STR | low | borderline |
| Cconscaffold_30050050 | Alkaloid | STR | low | borderline |
| Cconscaffold_30051300 | Alkaloid | STR | medium | pass |
| Cconscaffold_30054070 | Alkaloid | STR | medium | pass |
| Cconscaffold_30068020 | Alkaloid | STR | medium | pass |
| Cconscaffold_40071870 | Alkaloid | STR | low | borderline |
| Cconscaffold_40074400 | Alkaloid | STR | low | borderline |
| Cconscaffold_40088690 | Alkaloid | STR | medium | pass |
| Cconscaffold_40089870 | Alkaloid | STR | medium | pass |
| Cconscaffold_40091050 | Alkaloid | STR | low | borderline |
| Cconscaffold_40101990 | Alkaloid | STR | low | borderline |
| Cconscaffold_40102000 | Alkaloid | STR | low | borderline |
| Cconscaffold_50104010 | Alkaloid | STR | low | borderline |
| Cconscaffold_50104130 | Alkaloid | STR | low | borderline |
| Cconscaffold_50116770 | Alkaloid | STR | low | borderline |
| Cconscaffold_50119310 | Alkaloid | STR | low | borderline |
| Cconscaffold_50120650 | Alkaloid | STR | low | borderline |
| Cconscaffold_50121600 | Alkaloid | STR | low | borderline |
| Cconscaffold_60134940 | Alkaloid | STR | low | borderline |
| Cconscaffold_60134960 | Alkaloid | STR | medium | pass |
| Cconscaffold_60141990 | Alkaloid | STR | low | borderline |
| Cconscaffold_60143310 | Alkaloid | STR | low | borderline |
| Cconscaffold_70155810 | Alkaloid | STR | low | borderline |
| Cconscaffold_70158640 | Alkaloid | STR | low | borderline |
| Cconscaffold_70160160 | Alkaloid | STR | medium | pass |
| Cconscaffold_80169670 | Alkaloid | STR | low | borderline |
| Cconscaffold_80171140 | Alkaloid | STR | low | borderline |
| Cconscaffold_80171450 | Alkaloid | STR | low | borderline |
| Cconscaffold_10020780 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_20035590 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_30052720 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_30052730 | Alkaloid | T16H | medium | pass |
| Cconscaffold_30059170 | Alkaloid | T16H | low | borderline |
| Cconscaffold_30063810 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_30069090 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_30069100 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_40100890 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_40103630 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_50107270 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_50120500 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_60135420 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_60135430 | Alkaloid | T16H | medium | borderline |
| Cconscaffold_70150720 | Alkaloid | T16H | low | borderline |