PlantSME Plant secondary metabolism enzyme database

Corylus americana (corylus_americana)

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Imported from atlas release summary for Corylus americana.

2121
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.95% Alkaloid pathway 22.68% Phenylpropanoid pathway 17.68% Flavonoid pathway 15.7% Rosmarinic acid pathway 8.39% Steroid pathway 6.6%
Family Distribution
C3'H/CYP98A 5.93% UGT 5.91% 7DLGT 5.78% UFGT 5.72% C4H 5.38% BAHD 4.99% T3O 3.78% IFS 3.67%
Other Families 58.83%
More Families (95)
CYP76 163 3.48% POD 136 2.9% 4CL 132 2.82% F3H 130 2.77% DWF4/CYP90B1 123 2.63% CAD 108 2.31% F3'H/CYP75B 92 1.96% CAS 90 1.92% CODM/T6ODM 87 1.86% TRI/TRII 81 1.73% STR 78 1.66% NMT 67 1.43% LAC 65 1.39% COMT 62 1.32% SMT1/SMT2/SMT3 62 1.32% BR6OX2/CYP85A2 59 1.26% GES 56 1.2% TPS 56 1.2% HCT 50 1.07% CYP71 50 1.07% 16OMT 48 1.02% CYP90D1 45 0.96% TAT 44 0.94% H6H 41 0.88% T16H 39 0.83% IFR 38 0.81% ANR 37 0.79% GS 35 0.75% PYKS 31 0.66% PMT 29 0.62% G8O/G8H 29 0.62% CSE 29 0.62% SGD 28 0.6% RAS 28 0.6% BBE 27 0.58% PAL 24 0.51% BR6OX1/CYP85A1 24 0.51% CPD/CYP90A1 24 0.51% NCS 23 0.49% 7DLH 22 0.47% F3'5'H/CYP75A 20 0.43% CCR 20 0.43% CYP51G1 19 0.41% SLS 18 0.38% IO 17 0.36% FNS 17 0.36% COR 15 0.32% LAMT 14 0.3% 8HGO 12 0.26% ISY 12 0.26% DFR 11 0.23% ANS/LDOX 10 0.21% F5H/CYP84A 10 0.21% CCoAOMT 10 0.21% HPPR 10 0.21% CNMT 9 0.19% ROT3/CYP90C1 9 0.19% DET2 9 0.19% CPR 8 0.17% FPPS 8 0.17% MPO 7 0.15% CHS 7 0.15% GGPPS 7 0.15% AACT 7 0.15% CYP80B1 6 0.13% TYDC_DDC 5 0.11% CHI 5 0.11% SQS/FDFT1 5 0.11% SQE 5 0.11% MVD 5 0.11% ADC 4 0.09% DXS 4 0.09% MVK 4 0.09% SMO1/SMO2 3 0.06% HMGR 3 0.06% CYP719 2 0.04% XMT_MXMT_DXMT 2 0.04% TDC 2 0.04% DWF7 2 0.04% DWF5 2 0.04% DXR 2 0.04% PMK 2 0.04% HMGS 2 0.04% CMK/IspE 2 0.04% ODC 1 0.02% FLS 1 0.02% CPI1 1 0.02% DWF1 1 0.02% HYD1 1 0.02% FK 1 0.02% HDR/IspH 1 0.02% IDI 1 0.02% MDS/IspF 1 0.02% MCT/IspD 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 614 19 UGT (270) View species results
Alkaloid pathway 481 20 7DLGT (155) View species results
Phenylpropanoid pathway 375 12 POD (129) View species results
Flavonoid pathway 333 8 UFGT (261) View species results
Rosmarinic acid pathway 178 7 C4H (72) View species results
Steroid pathway 140 12 CAS (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 312 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
corylus_americana_CamerRush.07G078400.1.p Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
corylus_americana_CamerRush.07G125400.1.p Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
corylus_americana_CamerRush.07G148500.1.p Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
corylus_americana_CamerRush.07G176200.1.p Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
corylus_americana_CamerRush.08G024800.1.p Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
corylus_americana_CamerRush.08G041900.1.p Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
corylus_americana_CamerRush.08G116800.1.p Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
corylus_americana_CamerRush.08G133900.1.p Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
corylus_americana_CamerRush.08G153800.1.p Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
corylus_americana_CamerRush.09G009100.1.p Alkaloid NMT medium borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN
corylus_americana_CamerRush.09G085800.1.p Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
corylus_americana_CamerRush.09G093500.1.p Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
corylus_americana_CamerRush.10G080200.1.p Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
corylus_americana_CamerRush.11G018700.1.p Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
corylus_americana_CamerRush.11G059900.1.p Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
corylus_americana_CamerRush.11G095500.1.p Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
corylus_americana_CamerRush.11G121500.1.p Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH